RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 SALL3Q9BXA9 1300 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 ALKQ9UM73 1620 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 E7EWF7 191 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 ZNF213O14771 459 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 ZSCAN20P17040 1043 aaPredicted RBP7.51□□□□□ -1.21
RPF2-204ENST00000607388 POLA2Q14181 598 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 LDHAL6AQ6ZMR3 332 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
RPF2-204ENST00000607388 IP6K1Q92551 441 aa7.51□□□□□ -1.21
RPF2-204ENST00000607388 MRPS27Q92552 414 aaKnown RBP7.51□□□□□ -1.21
RPF2-204ENST00000607388 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
RPF2-204ENST00000607388 U3KPZ7 1027 aaPredicted RBP7.51□□□□□ -1.21
RPF2-204ENST00000607388 SPTLC2O15270 562 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 ZAP70P43403 619 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 SLC9C2Q5TAH2 1124 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 OLFM4Q6UX06 510 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 CNNM3Q8NE01 707 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 NEK11Q8NG66 645 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 PCMTD1Q96MG8 357 aaPredicted RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 ALG1Q9BT22 464 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 PRDM11Q9NQV5 511 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 ADCY9O60503 1353 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 FOXN1O15353 648 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 TOP1P11387 765 aaKnown RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 SYKP43405 635 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 IMMTQ16891 758 aaKnown RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 SLAIN2Q9P270 581 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 UBR1Q8IWV7 1749 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 USP6P35125 1406 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 KRT32Q14532 448 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 ENOX2Q16206 610 aaKnown RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 FBXO38Q6PIJ6 1188 aa7.5□□□□□ -1.21
RPF2-204ENST00000607388 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
RPF2-204ENST00000607388 ATP7BP35670 1465 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 TMEM232C9JQI7 657 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 ZNF202O95125 648 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 HSPD1P10809 573 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 PTPN12Q05209 780 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 SMAP1Q8IYB5 467 aaPredicted RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 NSUN7Q8NE18 718 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 SMTNL1A8MU46 457 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 IFIT3O14879 490 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 TFRCP02786 760 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 TPM3P06753 285 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 RHOXF2BP0C7M4 288 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 TDO2P48775 406 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 MRPS25P82663 173 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 SCARF1Q14162 830 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 CPLX2Q6PUV4 134 aaKnown RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 OSBP2Q969R2 916 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 RHOXF2Q9BQY4 288 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 TRIM34Q9BYJ4 488 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
RPF2-204ENST00000607388 AATKQ6ZMQ8 1374 aa7.49□□□□□ -1.21
RPF2-204ENST00000607388 M0R2C6 588 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 AKAP17AQ02040 695 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 MTX1Q13505 466 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 KCTD19Q17RG1 926 aaPredicted RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 CERS3Q8IU89 383 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 SENP2Q9HC62 589 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 FGAP02671 866 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 CDC25AP30304 524 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 CCT6AP40227 531 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 METAP2P50579 478 aaKnown RBP eCLIP7.48□□□□□ -1.21
RPF2-204ENST00000607388 KCNQ4P56696 695 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 RESTQ13127 1097 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 KMT5BQ4FZB7 885 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 SMIM5Q71RC9 77 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.48□□□□□ -1.21
RPF2-204ENST00000607388 CADPS2Q86UW7 1296 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 CCDC12Q8WUD4 166 aaPredicted RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 DPF2Q92785 391 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 TOM1O60784 492 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 ALDH1L1O75891 902 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 SLU7O95391 586 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 SNRPA1P09661 255 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 PDIA3P30101 505 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 FAM160A1Q05DH4 1040 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 TMEM67Q5HYA8 995 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 WWC2Q6AWC2 1192 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 DHX58Q96C10 678 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 PUS7LQ9H0K6 701 aaKnown RBP7.48□□□□□ -1.21
RPF2-204ENST00000607388 FANCLQ9NW38 375 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 TTC21AQ8NDW8 1320 aa7.48□□□□□ -1.21
RPF2-204ENST00000607388 VIRMAQ69YN4 1812 aaKnown RBP7.47□□□□□ -1.21
RPF2-204ENST00000607388 GOLGA8AA7E2F4 631 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 LMAN1P49257 510 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 FANCCQ00597 558 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 CPSF1Q10570 1443 aaKnown RBP7.47□□□□□ -1.21
RPF2-204ENST00000607388 TMCO3Q6UWJ1 677 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 CCDC102AQ96A19 550 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 DRC1Q96MC2 740 aa7.47□□□□□ -1.21
RPF2-204ENST00000607388 ARHGAP23Q9P227 1491 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms