RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 YEATS4O95619 227 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 CHGBP05060 677 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 MYL6BP14649 208 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 NDUFA8P51970 172 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 ARMCX5Q6P1M9 558 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 ANKRD13DQ6ZTN6 518 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 TMC6Q7Z403 805 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
MSH6-212ENST00000607272 NCOA5Q9HCD5 579 aaKnown RBP14.5□□□□□ -0.09
MSH6-212ENST00000607272 IFNKQ9P0W0 207 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 GUCY1B3Q02153 619 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 STK38Q15208 465 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 DPCR1Q3MIW9 517 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 SYT10Q6XYQ8 523 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 FBXW7Q969H0 707 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 POLR3EQ9NVU0 708 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 ZNF446Q9NWS9 450 aa14.5□□□□□ -0.09
MSH6-212ENST00000607272 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
MSH6-212ENST00000607272 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
MSH6-212ENST00000607272 ERCC6LQ2NKX8 1250 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 ARHGEF25Q86VW2 580 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 EVCP57679 992 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 NLRP12P59046 1061 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 ZMYM1Q5SVZ6 1142 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 BRAPQ7Z569 592 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 PAG1Q9NWQ8 432 aa14.49□□□□□ -0.09
MSH6-212ENST00000607272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSH6-212ENST00000607272 SPTLC2O15270 562 aa14.48□□□□□ -0.09
MSH6-212ENST00000607272 DHX16O60231 1041 aaKnown RBP14.48□□□□□ -0.09
MSH6-212ENST00000607272 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
MSH6-212ENST00000607272 FDPSP14324 419 aaKnown RBP14.48□□□□□ -0.09
MSH6-212ENST00000607272 RGPD2P0DJD1 1756 aa14.48□□□□□ -0.09
MSH6-212ENST00000607272 IKBKBO14920 756 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 NPHP1O15259 732 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 GCP02774 474 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 ETF1P62495 437 aaKnown RBP14.47□□□□□ -0.09
MSH6-212ENST00000607272 UBE3BQ7Z3V4 1068 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 SRRTQ9BXP5 876 aaKnown RBP14.47□□□□□ -0.09
MSH6-212ENST00000607272 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
MSH6-212ENST00000607272 PHLPP2Q6ZVD8 1323 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 ABCC6O95255 1503 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 GOLIM4O00461 696 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 ZNF202O95125 648 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 C8orf76Q96K31 380 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
MSH6-212ENST00000607272 GPR108Q9NPR9 543 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 CLIC4Q9Y696 253 aa14.47□□□□□ -0.09
MSH6-212ENST00000607272 NEDD4P46934 1319 aa14.46□□□□□ -0.09
MSH6-212ENST00000607272 NCAPHQ15003 741 aa14.46□□□□□ -0.09
MSH6-212ENST00000607272 SYNE3Q6ZMZ3 975 aa14.46□□□□□ -0.09
MSH6-212ENST00000607272 FBXO18Q8NFZ0 1043 aa14.46□□□□□ -0.09
MSH6-212ENST00000607272 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
MSH6-212ENST00000607272 SIPA1L3O60292 1781 aaPredicted RBP14.46□□□□□ -0.09
MSH6-212ENST00000607272 A0A087WZG4 1122 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 CMA1P23946 247 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 CLCN6P51797 869 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 SLC39A6Q13433 755 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 ARHGAP29Q52LW3 1261 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 FMNL2Q96PY5 1086 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 CALCOCO1Q9P1Z2 691 aa14.46□□□□□ -0.1
MSH6-212ENST00000607272 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 TPM1P09493 284 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 FANCCQ00597 558 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 MYSM1Q5VVJ2 828 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 CADPS2Q86UW7 1296 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 UBXN4Q92575 508 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 LAMA4Q16363 1823 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 RNF113AO15541 343 aaKnown RBP14.45□□□□□ -0.1
MSH6-212ENST00000607272 PPFIA3O75145 1194 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
MSH6-212ENST00000607272 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 LRP10Q7Z4F1 713 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 NEUROD6Q96NK8 337 aa14.45□□□□□ -0.1
MSH6-212ENST00000607272 BIN1O00499 593 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 MYO1BO43795 1136 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
MSH6-212ENST00000607272 PNMA6AP0CW24 399 aaPredicted RBP14.44□□□□□ -0.1
MSH6-212ENST00000607272 CHST3Q7LGC8 479 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 DNAI1Q9UI46 699 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 ADAMTS7Q9UKP4 1686 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 MAST3O60307 1309 aa14.44□□□□□ -0.1
MSH6-212ENST00000607272 LRRFIP1Q32MZ4 808 aaKnown RBP14.43□□□□□ -0.1
MSH6-212ENST00000607272 AXDND1Q5T1B0 1012 aaPredicted RBP14.43□□□□□ -0.1
MSH6-212ENST00000607272 ANO1Q5XXA6 986 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 TMCO3Q6UWJ1 677 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 LMBR1LQ6UX01 489 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 FCHSD1Q86WN1 690 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 ATP8B1O43520 1251 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 ZRANB2O95218 330 aaKnown RBP eCLIP14.43□□□□□ -0.1
MSH6-212ENST00000607272 PFKFB1P16118 471 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 LMOD1P29536 600 aaPredicted RBP14.43□□□□□ -0.1
MSH6-212ENST00000607272 CASP7P55210 303 aa14.43□□□□□ -0.1
MSH6-212ENST00000607272 MNS1Q8NEH6 495 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms