RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 RIPOR2Q9Y4F9 1068 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 UBTFL1P0CB47 393 aaPredicted RBP12.5□□□□□ -0.41
CTSA-215ENST00000607187 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
CTSA-215ENST00000607187 RSBN1LQ6PCB5 846 aaPredicted RBP12.5□□□□□ -0.41
CTSA-215ENST00000607187 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
CTSA-215ENST00000607187 TRPM4Q8TD43 1214 aa12.5□□□□□ -0.41
CTSA-215ENST00000607187 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
CTSA-215ENST00000607187 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
CTSA-215ENST00000607187 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
CTSA-215ENST00000607187 MROH5Q6ZUA9 1318 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 PLIN1O60240 522 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
CTSA-215ENST00000607187 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 GMLQ99445 158 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 MEIS3Q99687 375 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 CD209Q9NNX6 404 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 TNNQ9UQP3 1299 aa12.49□□□□□ -0.41
CTSA-215ENST00000607187 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
CTSA-215ENST00000607187 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
CTSA-215ENST00000607187 UBE4AQ14139 1066 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 DACT2Q5SW24 774 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 STRIP1Q5VSL9 837 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 ZKSCAN2Q63HK3 967 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
CTSA-215ENST00000607187 EGFRP00533 1210 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 GNAI3P08754 354 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 PTPN12Q05209 780 aaKnown RBP12.47□□□□□ -0.41
CTSA-215ENST00000607187 TBC1D10BQ4KMP7 808 aaPredicted RBP12.47□□□□□ -0.41
CTSA-215ENST00000607187 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 CLUAP1Q96AJ1 413 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
CTSA-215ENST00000607187 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 USP17L8P0C7I0 530 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 IL1R1P14778 569 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 METTL24Q5JXM2 366 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 ZNF804AQ7Z570 1209 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
CTSA-215ENST00000607187 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
CTSA-215ENST00000607187 EYA2O00167 538 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 PDE8BO95263 885 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 MMP14P50281 582 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 GTF2IP78347 998 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 KIF4BQ2VIQ3 1234 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
CTSA-215ENST00000607187 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
CTSA-215ENST00000607187 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
CTSA-215ENST00000607187 MYH13Q9UKX3 1938 aa12.45□□□□□ -0.42
CTSA-215ENST00000607187 TRAF5O00463 557 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 CIAO1O76071 339 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 SASH1O94885 1247 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
CTSA-215ENST00000607187 GYG1P46976 350 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 FMR1Q06787 632 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTSA-215ENST00000607187 MTX1Q13505 466 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 ATG9AQ7Z3C6 839 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 FAM84BQ96KN1 310 aaPredicted RBP12.44□□□□□ -0.42
CTSA-215ENST00000607187 MYOZ2Q9NPC6 264 aa12.44□□□□□ -0.42
CTSA-215ENST00000607187 ARAP2Q8WZ64 1704 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 GNAI2P04899 355 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 RLBP1P12271 317 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 FGFR2P21802 821 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 PDE4AP27815 886 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 MFSD10Q14728 455 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 CST9Q5W186 159 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 FBXO33Q7Z6M2 555 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 FTSJ3Q8IY81 847 aaKnown RBP12.43□□□□□ -0.42
CTSA-215ENST00000607187 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
CTSA-215ENST00000607187 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 JMYQ8N9B5 988 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
CTSA-215ENST00000607187 COPRSQ9NQ92 184 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 ECM29Q5VYK3 1845 aa12.43□□□□□ -0.42
CTSA-215ENST00000607187 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
CTSA-215ENST00000607187 SCARF1Q14162 830 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
CTSA-215ENST00000607187 KRT26Q7Z3Y9 468 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 CERS5Q8N5B7 392 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 DCPSQ96C86 337 aaKnown RBP12.42□□□□□ -0.42
CTSA-215ENST00000607187 SIL1Q9H173 461 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 PA2G4Q9UQ80 394 aaKnown RBP12.42□□□□□ -0.42
CTSA-215ENST00000607187 ARIH1Q9Y4X5 557 aaPredicted RBP12.42□□□□□ -0.42
CTSA-215ENST00000607187 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
CTSA-215ENST00000607187 ASTN2O75129 1339 aaPredicted RBP12.41□□□□□ -0.42
CTSA-215ENST00000607187 FAM205AQ6ZU69 1335 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
CTSA-215ENST00000607187 CAVIN4Q5BKX8 364 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms