RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 MYO1BO43795 1136 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 SPDYE6P0CI01 402 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 CASP7P55210 303 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 CHRNDQ07001 517 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 CRHR2Q13324 411 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
SSBP4-214ENST00000607020 MKI67P46013 3256 aaKnown RBP19.21■□□□□ 0.67
SSBP4-214ENST00000607020 SSC5DA1L4H1 1573 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 USP2O75604 605 aaPredicted RBP19.2■□□□□ 0.66
SSBP4-214ENST00000607020 IL1R1P14778 569 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 GJA5P36382 358 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 KCNJ4P48050 445 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
SSBP4-214ENST00000607020 SP3Q02447 781 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 GCKRQ14397 625 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 CD99L2Q8TCZ2 262 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 PTPN18Q99952 460 aa19.2■□□□□ 0.66
SSBP4-214ENST00000607020 EN2P19622 333 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-214ENST00000607020 CFAP100Q494V2 611 aa19.19■□□□□ 0.66
SSBP4-214ENST00000607020 ANKRD13AQ8IZ07 590 aa19.19■□□□□ 0.66
SSBP4-214ENST00000607020 PRMT6Q96LA8 375 aaPredicted RBP19.19■□□□□ 0.66
SSBP4-214ENST00000607020 STK31Q9BXU1 1019 aa19.19■□□□□ 0.66
SSBP4-214ENST00000607020 FXR1P51114 621 aaKnown RBP eCLIP19.18■□□□□ 0.66
SSBP4-214ENST00000607020 NBPF12Q5TAG4 269 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-214ENST00000607020 PCDHAC2Q9Y5I4 1007 aa19.18■□□□□ 0.66
SSBP4-214ENST00000607020 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
SSBP4-214ENST00000607020 ARHGEF6Q15052 776 aa19.17■□□□□ 0.66
SSBP4-214ENST00000607020 ZNF333Q96JL9 665 aa19.17■□□□□ 0.66
SSBP4-214ENST00000607020 MS4A4AQ96JQ5 239 aa19.17■□□□□ 0.66
SSBP4-214ENST00000607020 CLRN2A0PK11 232 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 CAP1Q01518 475 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 RASA3Q14644 834 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 G2E3Q7L622 706 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 TMEM106CQ9BVX2 250 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 MYH16Q9H6N6 1097 aa19.16■□□□□ 0.66
SSBP4-214ENST00000607020 ZNF646O15015 1829 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-214ENST00000607020 SNAP23O00161 211 aa19.15■□□□□ 0.66
SSBP4-214ENST00000607020 SLC4A2P04920 1241 aa19.15■□□□□ 0.66
SSBP4-214ENST00000607020 ZNF804AQ7Z570 1209 aa19.15■□□□□ 0.66
SSBP4-214ENST00000607020 LINS1Q8NG48 757 aa19.15■□□□□ 0.66
SSBP4-214ENST00000607020 TNFAIP1Q13829 316 aa19.14■□□□□ 0.65
SSBP4-214ENST00000607020 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
SSBP4-214ENST00000607020 VEZTQ9HBM0 779 aa19.14■□□□□ 0.65
SSBP4-214ENST00000607020 AOX1Q06278 1338 aa19.14■□□□□ 0.65
SSBP4-214ENST00000607020 KIAA0100Q14667 2235 aaKnown RBP19.14■□□□□ 0.65
SSBP4-214ENST00000607020 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-214ENST00000607020 TAF5LO75529 589 aa19.13■□□□□ 0.65
SSBP4-214ENST00000607020 OPTNQ96CV9 577 aa19.13■□□□□ 0.65
SSBP4-214ENST00000607020 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-214ENST00000607020 FAM205AQ6ZU69 1335 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 FLIIQ13045 1269 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 TWISTNBQ3B726 338 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 HELBQ8NG08 1087 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 DNAAF4Q8WXU2 420 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 BRI3BPQ8WY22 251 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 TEPSINQ96N21 525 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 ZFYVE28Q9HCC9 887 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 ZNF70Q9UC06 446 aaPredicted RBP19.12■□□□□ 0.65
SSBP4-214ENST00000607020 SERPINA10Q9UK55 444 aa19.12■□□□□ 0.65
SSBP4-214ENST00000607020 GTF2A2P52657 109 aa19.11■□□□□ 0.65
SSBP4-214ENST00000607020 FOXO4P98177 505 aa19.11■□□□□ 0.65
SSBP4-214ENST00000607020 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
SSBP4-214ENST00000607020 ELP3Q9H9T3 547 aa19.11■□□□□ 0.65
SSBP4-214ENST00000607020 RBM5P52756 815 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSBP4-214ENST00000607020 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
SSBP4-214ENST00000607020 SLC9C1Q4G0N8 1177 aa19.1■□□□□ 0.65
SSBP4-214ENST00000607020 COLQQ9Y215 455 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-214ENST00000607020 PTCH2Q9Y6C5 1203 aa19.1■□□□□ 0.65
SSBP4-214ENST00000607020 MAP3K9P80192 1104 aa19.09■□□□□ 0.65
SSBP4-214ENST00000607020 TAF1CQ15572 869 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-214ENST00000607020 TDRD7Q8NHU6 1098 aaKnown RBP19.09■□□□□ 0.65
SSBP4-214ENST00000607020 CENPFP49454 3210 aa19.09■□□□□ 0.65
SSBP4-214ENST00000607020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.64
SSBP4-214ENST00000607020 ZCCHC17Q9NP64 241 aaKnown RBP19.08■□□□□ 0.64
SSBP4-214ENST00000607020 CCL15-CCL14A0A0B4J2E2 113 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 GNRH1P01148 92 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
SSBP4-214ENST00000607020 VGLL4Q14135 290 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 CCL15Q16663 113 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 SLC4A8Q2Y0W8 1093 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
SSBP4-214ENST00000607020 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
SSBP4-214ENST00000607020 TDRD3Q9H7E2 651 aaKnown RBP19.07■□□□□ 0.64
SSBP4-214ENST00000607020 IL16Q14005 1332 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 TLR2O60603 784 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 UBE4AQ14139 1066 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SSBP4-214ENST00000607020 MFSD14BQ5SR56 506 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 LDHAL6AQ6ZMR3 332 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 TTF2Q9UNY4 1162 aaKnown RBP19.06■□□□□ 0.64
SSBP4-214ENST00000607020 JAG2Q9Y219 1238 aa19.06■□□□□ 0.64
SSBP4-214ENST00000607020 SPDYE5A6NIY4 337 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 WDHD1O75717 1129 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms