RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PDE6AP16499 860 aa18.77■□□□□ 0.59
CTSA-214ENST00000606788 GNPATO15228 680 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 RALYLQ86SE5 291 aaKnown RBP18.76■□□□□ 0.59
CTSA-214ENST00000606788 AIDAQ96BJ3 306 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 CDCA7Q9BWT1 371 aaPredicted RBP18.76■□□□□ 0.59
CTSA-214ENST00000606788 SENP2Q9HC62 589 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 NTSR2O95665 410 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 LIG1P18858 919 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 CTDSPL2Q05D32 466 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 CHRNDQ07001 517 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 SPATA5Q8NB90 893 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.76■□□□□ 0.593e-6■■□□□ 12.8
CTSA-214ENST00000606788 NUP98P52948 1817 aa18.76■□□□□ 0.59
CTSA-214ENST00000606788 KLF18A0A0U1RQI7 1052 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 ADD2P35612 726 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 SLC4A8Q2Y0W8 1093 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 CCDC152Q4G0S7 254 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 TBC1D9BQ66K14 1250 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 CKAP2LQ8IYA6 745 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 LPIN2Q92539 896 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 TSPY26PQ9H489 355 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 LRP6O75581 1613 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 B4E1Z4 1266 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 MBD4O95243 580 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 SLC5A1P13866 664 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 UBE2HP62256 183 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 KRT85P78386 507 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 NSUN7Q8NE18 718 aaKnown RBP18.75■□□□□ 0.59
CTSA-214ENST00000606788 SPATA32Q96LK8 384 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 THRAP3Q9Y2W1 955 aaKnown RBP18.75■□□□□ 0.59
CTSA-214ENST00000606788 PDIA3P30101 505 aaKnown RBP18.75■□□□□ 0.59
CTSA-214ENST00000606788 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 USP21Q9UK80 565 aa18.75■□□□□ 0.59
CTSA-214ENST00000606788 GOLGA8BA8MQT2 603 aa18.74■□□□□ 0.59
CTSA-214ENST00000606788 PDCP20941 246 aa18.74■□□□□ 0.59
CTSA-214ENST00000606788 EXOSC10Q01780 885 aaKnown RBP18.74■□□□□ 0.59
CTSA-214ENST00000606788 SYAP1Q96A49 352 aaPredicted RBP18.74■□□□□ 0.59
CTSA-214ENST00000606788 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
CTSA-214ENST00000606788 CHMP4CQ96CF2 233 aa18.74■□□□□ 0.59
CTSA-214ENST00000606788 LRP2BPQ9P2M1 347 aa18.74■□□□□ 0.59
CTSA-214ENST00000606788 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
CTSA-214ENST00000606788 CELF1Q92879 486 aaKnown RBP18.73■□□□□ 0.59
CTSA-214ENST00000606788 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
CTSA-214ENST00000606788 ISY1Q9ULR0 285 aaKnown RBP18.73■□□□□ 0.59
CTSA-214ENST00000606788 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
CTSA-214ENST00000606788 KLRK1P26718 216 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 ANTXR2P58335 489 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 BICD2Q8TD16 824 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 MYO5AQ9Y4I1 1855 aaKnown RBP18.72■□□□□ 0.59
CTSA-214ENST00000606788 LRRFIP1Q32MZ4 808 aaKnown RBP18.72■□□□□ 0.59
CTSA-214ENST00000606788 AIFM3Q96NN9 605 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 NBPF3Q9H094 633 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 A0A087WWV3 80 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
CTSA-214ENST00000606788 MICU3Q86XE3 530 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 TFCP2L1Q9NZI6 479 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
CTSA-214ENST00000606788 AHDC1Q5TGY3 1603 aaPredicted RBP18.71■□□□□ 0.59
CTSA-214ENST00000606788 PFKFB2O60825 505 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 CCDC183Q5T5S1 534 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 TAF1P21675 1872 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 HMGB1P09429 215 aaKnown RBP18.71■□□□□ 0.59
CTSA-214ENST00000606788 CYB5R4Q7L1T6 521 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 VPS37DQ86XT2 251 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTSA-214ENST00000606788 RAI14Q9P0K7 980 aa18.71■□□□□ 0.59
CTSA-214ENST00000606788 MROH5Q6ZUA9 1318 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 ESPNB1AK53 854 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 FGFR2P21802 821 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 SDR42E1Q8WUS8 393 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 DACT1Q9NYF0 836 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 USP25Q9UHP3 1055 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 LTBP4Q8N2S1 1624 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 CPLX1O14810 134 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 TRDNQ13061 729 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 LCORLQ8N3X6 602 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 ERCC4Q92889 916 aaPredicted RBP18.7■□□□□ 0.58
CTSA-214ENST00000606788 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
CTSA-214ENST00000606788 MCM5P33992 734 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 ADD1P35611 737 aaKnown RBP18.7■□□□□ 0.58
CTSA-214ENST00000606788 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
CTSA-214ENST00000606788 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
CTSA-214ENST00000606788 COL4A1P02462 1669 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
CTSA-214ENST00000606788 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
CTSA-214ENST00000606788 MINDY4BA8MYZ0 360 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 CCDC173Q0VFZ6 552 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms