RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 KIAA0825Q8IV33 1275 aa15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
SHROOM1-207ENST00000606676 TMEM88BA6NKF7 163 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 SLC5A1P13866 664 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 MMP14P50281 582 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 NBPF9Q3BBW0 867 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 C20orf194Q5TEA3 1177 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 CST9Q5W186 159 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 CDC37L1Q7L3B6 337 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 USP48Q86UV5 1035 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 OGFOD1Q8N543 542 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 SSH3Q8TE77 659 aa15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 IQSEC3Q9UPP2 1182 aaPredicted RBP15.9■□□□□ 0.14
SHROOM1-207ENST00000606676 TFCP2Q12800 502 aa15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 ZBED3Q96IU2 234 aaPredicted RBP15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
SHROOM1-207ENST00000606676 WNT10BO00744 389 aa15.88■□□□□ 0.13
SHROOM1-207ENST00000606676 MFSD14BQ5SR56 506 aa15.88■□□□□ 0.13
SHROOM1-207ENST00000606676 ANGEL2Q5VTE6 544 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-207ENST00000606676 KRT26Q7Z3Y9 468 aa15.88■□□□□ 0.13
SHROOM1-207ENST00000606676 DCPSQ96C86 337 aaKnown RBP15.88■□□□□ 0.13
SHROOM1-207ENST00000606676 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 F8W031 263 aaPredicted RBP15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 TIMM10P62072 90 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 ZBTB40Q9NUA8 1239 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
SHROOM1-207ENST00000606676 ADORA1P30542 326 aa15.86■□□□□ 0.13
SHROOM1-207ENST00000606676 CHAF1AQ13111 956 aaPredicted RBP15.86■□□□□ 0.13
SHROOM1-207ENST00000606676 G3BP1Q13283 466 aaKnown RBP eCLIP15.86■□□□□ 0.13
SHROOM1-207ENST00000606676 GRIK5Q16478 980 aa15.86■□□□□ 0.13
SHROOM1-207ENST00000606676 MTMR14Q8NCE2 650 aa15.86■□□□□ 0.13
SHROOM1-207ENST00000606676 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 FRAT2O75474 233 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
SHROOM1-207ENST00000606676 COL1A1P02452 1464 aaPredicted RBP15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 RASSF10A6NK89 507 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 ZBTB22O15209 634 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 PHKA1P46020 1223 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 DLGAP5Q15398 846 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 SULF1Q8IWU6 871 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 XAGE2Q96GT9 111 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 TTF2Q9UNY4 1162 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 SCAF8Q9UPN6 1271 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 AOX1Q06278 1338 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 CNTNAP1P78357 1384 aa15.84■□□□□ 0.13
SHROOM1-207ENST00000606676 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 SURF6O75683 361 aaKnown RBP15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 CFAP100Q494V2 611 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 TBC1D22AQ8WUA7 517 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 PRMT6Q96LA8 375 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
SHROOM1-207ENST00000606676 NEUROD6Q96NK8 337 aa15.82■□□□□ 0.12
SHROOM1-207ENST00000606676 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
SHROOM1-207ENST00000606676 GNL3LQ9NVN8 582 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-207ENST00000606676 SERPINA10Q9UK55 444 aa15.82■□□□□ 0.12
SHROOM1-207ENST00000606676 ABT1Q9ULW3 272 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-207ENST00000606676 POLR2AP24928 1970 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 VEGFBP49765 207 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 DEFB115Q30KQ5 88 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 SAPCD2Q86UD0 394 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 RPAP2Q8IXW5 612 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 WDR66Q8TBY9 1149 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 CDCA5Q96FF9 252 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 GPR108Q9NPR9 543 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
SHROOM1-207ENST00000606676 SEMA3EO15041 775 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 CRKP46108 304 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 RBM5P52756 815 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 HDLBPQ00341 1268 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 PRAMEF18Q5VWM3 479 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
SHROOM1-207ENST00000606676 SALL1Q9NSC2 1324 aa15.79■□□□□ 0.12
SHROOM1-207ENST00000606676 CLRN2A0PK11 232 aa15.79■□□□□ 0.12
SHROOM1-207ENST00000606676 RRP1P56182 461 aaKnown RBP15.79■□□□□ 0.12
SHROOM1-207ENST00000606676 RASGRF1Q13972 1273 aa15.79■□□□□ 0.12
SHROOM1-207ENST00000606676 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
SHROOM1-207ENST00000606676 APOBEC3FQ8IUX4 373 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms