RNA–Protein interactions for RNA: ENST00000605476.5

SRGAP2-214, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-214ENST00000605476 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 RTL9Q8NET4 1388 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 SYCE3A1L190 88 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 ATRNO75882 1429 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 SLC5A1P13866 664 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 SCRN1Q12765 414 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 RASGRF1Q13972 1273 aa12.35□□□□□ -0.43
SRGAP2-214ENST00000605476 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 PDE6AP16499 860 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 AMIGO3Q86WK7 504 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 SPATA5Q8NB90 893 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 AGXT2Q9BYV1 514 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 ATP6V1DQ9Y5K8 247 aa12.34□□□□□ -0.43
SRGAP2-214ENST00000605476 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 CLCN1P35523 988 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 BCAMP50895 628 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 CHRNDQ07001 517 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 IMMTQ16891 758 aaKnown RBP12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 PFKFB2O60825 505 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 ZSCAN25Q6NSZ9 544 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 CTNNA3Q9UI47 895 aa12.33□□□□□ -0.44
SRGAP2-214ENST00000605476 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 PDCP20941 246 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 MYH13Q9UKX3 1938 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 GNPATO15228 680 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 CTDNEP1O95476 244 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 NASPP49321 788 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
SRGAP2-214ENST00000605476 LRSAM1Q6UWE0 723 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 ZNF213O14771 459 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 UBE2HP62256 183 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 MB21D2Q8IYB1 491 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
SRGAP2-214ENST00000605476 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 ANTXR2P58335 489 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 CDC5LQ99459 802 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 TNRC6CQ9HCJ0 1690 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 PRC1O43663 620 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 APPP05067 770 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 FOSBP53539 338 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 TBC1D10CQ8IV04 446 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
SRGAP2-214ENST00000605476 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 STRBPQ96SI9 672 aaKnown RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 GYG1P46976 350 aa12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 ZNF274Q96GC6 653 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 LLPHQ9BRT6 129 aaKnown RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 COL1A1P02452 1464 aaPredicted RBP12.29□□□□□ -0.44
SRGAP2-214ENST00000605476 SALL1Q9NSC2 1324 aa12.28□□□□□ -0.44
SRGAP2-214ENST00000605476 ECM29Q5VYK3 1845 aa12.28□□□□□ -0.44
SRGAP2-214ENST00000605476 MBD4O95243 580 aa12.28□□□□□ -0.44
SRGAP2-214ENST00000605476 MCM5P33992 734 aa12.28□□□□□ -0.44
SRGAP2-214ENST00000605476 KRT85P78386 507 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms