RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
TUBE1-205ENST00000603651 CEP41Q9BYV8 373 aa9.84□□□□□ -0.83
TUBE1-205ENST00000603651 OSGEPQ9NPF4 335 aa9.84□□□□□ -0.83
TUBE1-205ENST00000603651 SOX1O00570 391 aaPredicted RBP9.83□□□□□ -0.84
TUBE1-205ENST00000603651 SART1O43290 800 aaKnown RBP9.83□□□□□ -0.84
TUBE1-205ENST00000603651 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
TUBE1-205ENST00000603651 WNT8BQ93098 351 aa9.83□□□□□ -0.84
TUBE1-205ENST00000603651 A0A1W2PP55 124 aa9.82□□□□□ -0.84
TUBE1-205ENST00000603651 Q6ZS46 218 aa9.82□□□□□ -0.84
TUBE1-205ENST00000603651 RUSC1Q9BVN2 902 aa9.82□□□□□ -0.84
TUBE1-205ENST00000603651 LIN7BQ9HAP6 207 aa9.82□□□□□ -0.84
TUBE1-205ENST00000603651 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
TUBE1-205ENST00000603651 FSTP19883 344 aa9.81□□□□□ -0.84
TUBE1-205ENST00000603651 GSTM4Q03013 218 aa9.81□□□□□ -0.84
TUBE1-205ENST00000603651 SPRED3Q2MJR0 410 aa9.81□□□□□ -0.84
TUBE1-205ENST00000603651 BHLHE41Q9C0J9 482 aaPredicted RBP9.81□□□□□ -0.84
TUBE1-205ENST00000603651 NIF3L1Q9GZT8 377 aa9.81□□□□□ -0.84
TUBE1-205ENST00000603651 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
TUBE1-205ENST00000603651 NEFLP07196 543 aa9.8□□□□□ -0.84
TUBE1-205ENST00000603651 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
TUBE1-205ENST00000603651 FDX2Q6P4F2 183 aa9.8□□□□□ -0.84
TUBE1-205ENST00000603651 GALNT12Q8IXK2 581 aa9.8□□□□□ -0.84
TUBE1-205ENST00000603651 STOML1Q9UBI4 398 aa9.8□□□□□ -0.84
TUBE1-205ENST00000603651 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
TUBE1-205ENST00000603651 ARMC10Q8N2F6 343 aa9.79□□□□□ -0.84
TUBE1-205ENST00000603651 RNF208Q9H0X6 261 aa9.79□□□□□ -0.84
TUBE1-205ENST00000603651 A0A096LPE4 126 aa9.78□□□□□ -0.84
TUBE1-205ENST00000603651 A0A1W2PPZ6 126 aa9.78□□□□□ -0.84
TUBE1-205ENST00000603651 CPNE3O75131 537 aaKnown RBP9.78□□□□□ -0.84
TUBE1-205ENST00000603651 ESRRAP11474 423 aaPredicted RBP9.78□□□□□ -0.84
TUBE1-205ENST00000603651 EHD4Q9H223 541 aa9.78□□□□□ -0.84
TUBE1-205ENST00000603651 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
TUBE1-205ENST00000603651 NPHS2Q9NP85 383 aa9.78□□□□□ -0.84
TUBE1-205ENST00000603651 GPR182O15218 404 aa9.77□□□□□ -0.85
TUBE1-205ENST00000603651 GAS2O43903 313 aaKnown RBP9.77□□□□□ -0.85
TUBE1-205ENST00000603651 GRIA4P48058 902 aa9.77□□□□□ -0.85
TUBE1-205ENST00000603651 PREPP48147 710 aa9.77□□□□□ -0.85
TUBE1-205ENST00000603651 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
TUBE1-205ENST00000603651 ZFP64Q9NPA5 681 aa9.77□□□□□ -0.85
TUBE1-205ENST00000603651 SOWAHDA6NJG2 315 aa9.76□□□□□ -0.85
TUBE1-205ENST00000603651 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-205ENST00000603651 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
TUBE1-205ENST00000603651 CCNJLQ8IV13 435 aa9.76□□□□□ -0.85
TUBE1-205ENST00000603651 FAM46AQ96IP4 442 aaKnown RBP9.76□□□□□ -0.85
TUBE1-205ENST00000603651 TCF12Q99081 682 aa9.76□□□□□ -0.85
TUBE1-205ENST00000603651 LOC100289279A0A1B0GTE1 492 aa9.75□□□□□ -0.85
TUBE1-205ENST00000603651 BMP3P12645 472 aa9.75□□□□□ -0.85
TUBE1-205ENST00000603651 ARTNQ5T4W7 220 aa9.75□□□□□ -0.85
TUBE1-205ENST00000603651 NUTM2GQ5VZR2 741 aa9.75□□□□□ -0.85
TUBE1-205ENST00000603651 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
TUBE1-205ENST00000603651 C12orf50Q8NA57 414 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-205ENST00000603651 HMX2A2RU54 273 aa9.74□□□□□ -0.85
TUBE1-205ENST00000603651 EIF1AYO14602 144 aaKnown RBP9.74□□□□□ -0.85
TUBE1-205ENST00000603651 RXRBP28702 533 aa9.74□□□□□ -0.85
TUBE1-205ENST00000603651 NBPF11Q86T75 865 aa9.74□□□□□ -0.85
TUBE1-205ENST00000603651 TRIM42Q8IWZ5 723 aa9.74□□□□□ -0.85
TUBE1-205ENST00000603651 C7orf69Q9H7B7 122 aa9.74□□□□□ -0.85
TUBE1-205ENST00000603651 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 SSTR4P31391 388 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 LRP8Q14114 963 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 UVSSAQ2YD98 709 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 CCDC74AQ96AQ1 378 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 MYRFLQ96LU7 910 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 CITED4Q96RK1 184 aa9.73□□□□□ -0.85
TUBE1-205ENST00000603651 CLEC4MQ9H2X3 399 aaPredicted RBP9.73□□□□□ -0.85
TUBE1-205ENST00000603651 BRD1O95696 1058 aa9.72□□□□□ -0.85
TUBE1-205ENST00000603651 DLGAP3O95886 979 aa9.72□□□□□ -0.85
TUBE1-205ENST00000603651 ZNF423Q2M1K9 1284 aa9.72□□□□□ -0.85
TUBE1-205ENST00000603651 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
TUBE1-205ENST00000603651 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-205ENST00000603651 DRD2P14416 443 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 MAPK1P28482 360 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 FAM20CQ8IXL6 584 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 SOX17Q9H6I2 414 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-205ENST00000603651 CYP4F12Q9HCS2 524 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 RNF112Q9ULX5 631 aa9.71□□□□□ -0.86
TUBE1-205ENST00000603651 MAOBP27338 520 aa9.7□□□□□ -0.86
TUBE1-205ENST00000603651 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
TUBE1-205ENST00000603651 EPS8L3Q8TE67 593 aaKnown RBP9.7□□□□□ -0.86
TUBE1-205ENST00000603651 DMRTB1Q96MA1 342 aa9.7□□□□□ -0.86
TUBE1-205ENST00000603651 CSRNP1Q96S65 589 aa9.7□□□□□ -0.86
TUBE1-205ENST00000603651 ZNF157P51786 506 aaPredicted RBP9.69□□□□□ -0.86
TUBE1-205ENST00000603651 POU4F3Q15319 338 aa9.69□□□□□ -0.86
TUBE1-205ENST00000603651 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.69□□□□□ -0.86
TUBE1-205ENST00000603651 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
TUBE1-205ENST00000603651 TMPRSS13Q9BYE2 586 aa9.69□□□□□ -0.86
TUBE1-205ENST00000603651 RBCK1Q9BYM8 510 aa9.69□□□□□ -0.86
TUBE1-205ENST00000603651 PCMTD2Q9NV79 361 aa9.69□□□□□ -0.86
TUBE1-205ENST00000603651 MEGF11A6BM72 1044 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 GSC2O15499 205 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 TGFB1P01137 390 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 USP11P51784 963 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 NFIAQ12857 509 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 EXOSC6Q5RKV6 272 aaKnown RBP9.68□□□□□ -0.86
TUBE1-205ENST00000603651 CLEC10AQ8IUN9 316 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 DNAJC25Q9H1X3 360 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 ZNF576Q9H609 170 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 DCTN4Q9UJW0 460 aa9.68□□□□□ -0.86
TUBE1-205ENST00000603651 GNEQ9Y223 722 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms