RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GMLQ99445 158 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 DENND4BO75064 1496 aaPredicted RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 KIF1CO43896 1103 aaKnown RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 HDGFP51858 240 aaKnown RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 CCSAPQ6IQ19 270 aaPredicted RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 CDAN1Q8IWY9 1227 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 NKX2-3Q8TAU0 364 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 POLG2Q9UHN1 485 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 TMCC3Q9ULS5 477 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ALKQ9UM73 1620 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ELL2O00472 640 aaPredicted RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ALDH1L1O75891 902 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 NR6A1Q15406 480 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 TKFCQ3LXA3 575 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 SLF2Q8IX21 1173 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 TAF4BQ92750 862 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 RNF34Q969K3 372 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ASB16Q96NS5 453 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 SIN3AQ96ST3 1273 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ATP10AO60312 1499 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 ENPP3O14638 875 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 NBNO60934 754 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 HMMRO75330 724 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 EPB42P16452 691 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 TTF1Q15361 905 aaPredicted RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 JPH3Q8WXH2 748 aaPredicted RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 PANK2Q9BZ23 570 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 BRMS1Q9HCU9 246 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 LUZP4Q9P127 313 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 MAP10Q9P2G4 905 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 CHMP3Q9Y3E7 222 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 FGRP09769 529 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 KCNA2P16389 499 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 CAPN2P17655 700 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 CCT2P78371 535 aaKnown RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 GABPB1Q06547 395 aaPredicted RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 MTMR2Q13614 643 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 PPP2R5AQ15172 486 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 PPP2R5BQ15173 497 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 TMEM259Q4ZIN3 620 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 ANO1Q5XXA6 986 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 CAPN12Q6ZSI9 719 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 SCUBE3Q8IX30 993 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 NDUFAF2Q8N183 169 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 SLC43A3Q8NBI5 491 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 SNX21Q969T3 373 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 EIF2AK1Q9BQI3 630 aaKnown RBP5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 TMX1Q9H3N1 280 aa5.94□□□□□ -1.46
SPTBN1-206ENST00000602898 LRRC9Q6ZRR7 1453 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 KDM5AP29375 1690 aaKnown RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 MYL3P08590 195 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 NFE2Q16621 373 aaPredicted RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 UVSSAQ2YD98 709 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 ZNF771Q7L3S4 317 aaPredicted RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 UHMK1Q8TAS1 419 aaKnown RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 ITFG2Q969R8 447 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 NLRP2Q9NX02 1062 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 DONSONQ9NYP3 566 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 CALCOCO1Q9P1Z2 691 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 PRMT3O60678 531 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 ZNF76P36508 570 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 CDC37Q16543 378 aaPredicted RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 IL31Q6EBC2 164 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 C16orf54Q6UWD8 224 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 SAMD3Q8N6K7 520 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 ZBTB9Q96C00 473 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 DUSP9Q99956 384 aaKnown RBP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 SPG7Q9UQ90 795 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 NHSL1Q5SYE7 1610 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 MED14O60244 1454 aa5.93□□□□□ -1.46
SPTBN1-206ENST00000602898 SOWAHBA6NEL2 793 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 FIBPO43427 364 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 CDC45O75419 566 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 AGR2O95994 175 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 MYL1P05976 194 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 PBX2P40425 430 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 NEK3P51956 506 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ECM1Q16610 540 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 MORN1Q5T089 497 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 WAPLQ7Z5K2 1190 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 KRT77Q7Z794 578 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ANKK1Q8NFD2 765 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 SH3TC2Q8TF17 1288 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 NOB1Q9ULX3 412 aaKnown RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ESYT3A0FGR9 886 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 RGS20O76081 388 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 ATP6V1AP38606 617 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 RAB27AP51159 221 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 GTF2A1P52655 376 aaPredicted RBP5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 CBX1P83916 185 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 C21orf62-AS1Q17RA5 79 aa5.92□□□□□ -1.46
SPTBN1-206ENST00000602898 TMEM95Q3KNT9 176 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms