RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 TCEANC2Q96MN5 208 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 TPD52P55327 224 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-216ENST00000602557 NUCB1Q02818 461 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 KANK3Q6NY19 840 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 ABCC5O15440 1437 aa9.82□□□□□ -0.84
CSMD1-216ENST00000602557 RPSAP08865 295 aaKnown RBP9.82□□□□□ -0.84
CSMD1-216ENST00000602557 E7EVH7 732 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 ZNF131P52739 623 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 TTC14Q96N46 770 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 GOLGA4Q13439 2230 aaKnown RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 PRXQ9BXM0 1461 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 ARID5AQ03989 594 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 KIAA0753Q2KHM9 967 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 ARHGEF2Q92974 986 aaKnown RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 RALGAPBQ86X10 1494 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 GOLGA6BA6NDN3 693 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 WDHD1O75717 1129 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 GSDMBQ8TAX9 411 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 MARCKSP29966 332 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 E2F5Q15329 346 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 NEK1Q96PY6 1258 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 UTP14AQ9BVJ6 771 aaKnown RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 VCXQ9H320 206 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 C6orf229H3BNL8 230 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 SMIM24O75264 130 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 GRIPAP1Q4V328 841 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 ERMNQ8TAM6 284 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 N4BP2L2Q92802 583 aaPredicted RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
CSMD1-216ENST00000602557 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
CSMD1-216ENST00000602557 SCAF11Q99590 1463 aaKnown RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 SDSP20132 328 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 DHX29Q7Z478 1369 aaKnown RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 PI4KAP2A4QPH2 592 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 COG7P83436 770 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 STXBP4Q6ZWJ1 553 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 PI4KAP1Q8N8J0 262 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 KLF18A0A0U1RQI7 1052 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 TTC36A6NLP5 189 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 MAP3K9P80192 1104 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 GOLGA5Q8TBA6 731 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 TRIM7Q9C029 511 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 RMND1Q9NWS8 449 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 JPH2Q9BR39 696 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 IQCGQ9H095 443 aaKnown RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 ADGRL1O94910 1474 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 CASQ2O14958 399 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 WTAPQ15007 396 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 IRAK4Q9NWZ3 460 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 FERP16591 822 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 ACTN2P35609 894 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 TSNARE1Q96NA8 513 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 ZSCAN16Q9H4T2 348 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 VPS41P49754 854 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 VAV2P52735 878 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 MUM1Q2TAK8 710 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 TTC19Q6DKK2 380 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-216ENST00000602557 LCA5Q86VQ0 697 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 HEATR3Q7Z4Q2 680 aa9.8□□□□□ -0.84
CSMD1-216ENST00000602557 ZBTB22O15209 634 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 ANXA1P04083 346 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 JRKLQ9Y4A0 524 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 ZNF75DP51815 510 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.79□□□□□ -0.84
CSMD1-216ENST00000602557 BAG3O95817 575 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 GNGT1P63211 74 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 ASIC1P78348 528 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 NEDD9Q14511 834 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 RGS22Q8NE09 1264 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 KCNG4Q8TDN1 519 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 BRF1Q92994 677 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 NOS1P29475 1434 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 PDE6BP35913 854 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
CSMD1-216ENST00000602557 RTL1A6NKG5 1358 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 RLBP1P12271 317 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 CCDC174Q6PII3 467 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 SELENOOQ9BVL4 669 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 RTN1Q16799 776 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 CHPF2Q9P2E5 772 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 NSD2O96028 1365 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-216ENST00000602557 CYLC1P35663 651 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-216ENST00000602557 SPAG5Q96R06 1193 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 MAP3K1Q13233 1512 aa9.79□□□□□ -0.84
CSMD1-216ENST00000602557 F13A1P00488 732 aa9.78□□□□□ -0.84
CSMD1-216ENST00000602557 MRPS27Q92552 414 aaKnown RBP9.78□□□□□ -0.84
CSMD1-216ENST00000602557 CTAGE1Q96RT6 745 aa9.78□□□□□ -0.84
CSMD1-216ENST00000602557 VCX3BQ9H321 246 aa9.78□□□□□ -0.84
CSMD1-216ENST00000602557 MCUR1Q96AQ8 359 aa9.78□□□□□ -0.84
CSMD1-216ENST00000602557 ZBTB43O43298 467 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms