RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 SALL3Q9BXA9 1300 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 CBFA2T2O43439 604 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 RBM6P78332 1123 aaKnown RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 XPCQ01831 940 aaPredicted RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 ZNF394Q53GI3 561 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 NAIF1Q69YI7 327 aaPredicted RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 NFXL1Q6ZNB6 911 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 HSCBQ8IWL3 235 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 CCDC26Q8TAB7 109 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 ANKRD24Q8TF21 1146 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 POLR3CQ9BUI4 534 aaPredicted RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 AXIN2Q9Y2T1 843 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 COL18A1P39060 1754 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 TMEM94Q12767 1356 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 SDSP20132 328 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 ZNF530Q6P9A1 599 aaPredicted RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 GOLGA6L1Q8N7Z2 621 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 ZNF579Q8NAF0 562 aaKnown RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 FBXO22Q8NEZ5 403 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 DEF6Q9H4E7 631 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 PHAXQ9H814 394 aaKnown RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 TMOD4Q9NZQ9 345 aa8.89□□□□□ -0.99
HCG18-244ENST00000602516 FBXO9Q9UK97 447 aaPredicted RBP8.89□□□□□ -0.99
HCG18-244ENST00000602516 RNMTO43148 476 aaKnown RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 WDHD1O75717 1129 aaPredicted RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 U2AF2P26368 475 aaKnown RBP eCLIP8.88□□□□□ -0.99
HCG18-244ENST00000602516 MAP2K2P36507 400 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 MECOMQ03112 1051 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 MYLK4Q86YV6 388 aaPredicted RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 PDCL2Q8N4E4 241 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 SAMD3Q8N6K7 520 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 CHMP5Q9NZZ3 219 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 XIRP1Q702N8 1843 aaKnown RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 IBTKQ9P2D0 1353 aaPredicted RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 ABCC6O95255 1503 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 PNMA6EA0A0J9YXQ4 647 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 CCDC194A0A1B0GVG4 234 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 NOLC1Q14978 699 aaKnown RBP eCLIP8.88□□□□□ -0.99
HCG18-244ENST00000602516 CCDC178Q5BJE1 867 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 LRRC27Q9C0I9 530 aa8.88□□□□□ -0.99
HCG18-244ENST00000602516 IQCGQ9H095 443 aaKnown RBP8.88□□□□□ -0.99
HCG18-244ENST00000602516 BTBD11A6QL63 1104 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 HMGB1P1B2RPK0 211 aaPredicted RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 KCNQ3O43525 872 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 HSP90AB1P08238 724 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 XBP1P17861 261 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 PDE1AP54750 535 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 TEFQ10587 303 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 PTK7Q13308 1070 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 HS1BP3Q53T59 392 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 AP1ARQ63HQ0 302 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 ILDR1Q86SU0 546 aaPredicted RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 ARL10Q8N8L6 244 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 ENOX1Q8TC92 643 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 GABBR1Q9UBS5 961 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 SCN11AQ9UI33 1791 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 UBAP1LF5GYI3 381 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 KCNA2P16389 499 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 C1orf131Q8NDD1 294 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 DIS3Q9Y2L1 958 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 SHTN1A0MZ66 631 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 KIAA2012Q0VF49 1180 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 CCDC173Q0VFZ6 552 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 MCM6Q14566 821 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 SLC5A9Q2M3M2 681 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 SUGP1Q8IWZ8 645 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 SSH3Q8TE77 659 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 LRRCC1Q9C099 1032 aa8.87□□□□□ -0.99
HCG18-244ENST00000602516 CPSF2Q9P2I0 782 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 LRRFIP2Q9Y608 721 aaKnown RBP8.87□□□□□ -0.99
HCG18-244ENST00000602516 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 KIF5CO60282 957 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 IMPDH2P12268 514 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 C4orf46Q504U0 113 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 BEND3Q5T5X7 828 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 MCTP2Q6DN12 878 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 ANKRD13BQ86YJ7 626 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 ATG3Q9NT62 314 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 CHPF2Q9P2E5 772 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 NOL7Q9UMY1 257 aaKnown RBP8.86□□□□□ -0.99
HCG18-244ENST00000602516 EXOC6BQ9Y2D4 811 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 TOM1O60784 492 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 UBTFL1P0CB47 393 aaPredicted RBP8.86□□□□□ -0.99
HCG18-244ENST00000602516 RWDD2BP57060 319 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
HCG18-244ENST00000602516 TEKT1Q969V4 418 aa8.86□□□□□ -0.99
HCG18-244ENST00000602516 SRCIN1Q9C0H9 1055 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms