RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 ARAP2Q8WZ64 1704 aa23.47■■□□□ 1.35
IRF3-231ENST00000602190 IL1R1P14778 569 aa23.47■■□□□ 1.35
IRF3-231ENST00000602190 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
IRF3-231ENST00000602190 INTS3Q68E01 1043 aaKnown RBP23.47■■□□□ 1.35
IRF3-231ENST00000602190 GCC1Q96CN9 775 aa23.47■■□□□ 1.35
IRF3-231ENST00000602190 TESPA1A2RU30 521 aaPredicted RBP23.46■■□□□ 1.35
IRF3-231ENST00000602190 PRKG1Q13976 671 aa23.46■■□□□ 1.35
IRF3-231ENST00000602190 FBXW7Q969H0 707 aa23.46■■□□□ 1.35
IRF3-231ENST00000602190 CLMNQ96JQ2 1002 aa23.46■■□□□ 1.35
IRF3-231ENST00000602190 SPDYE2BA6NHP3 402 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 SPDYE6P0CI01 402 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 GJA5P36382 358 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 DLGAP5Q15398 846 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 ARMC5Q96C12 935 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 SLC10A4Q96EP9 437 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 PCDHAC2Q9Y5I4 1007 aa23.45■■□□□ 1.34
IRF3-231ENST00000602190 AOX1Q06278 1338 aa23.44■■□□□ 1.34
IRF3-231ENST00000602190 POTEFA5A3E0 1075 aa23.44■■□□□ 1.34
IRF3-231ENST00000602190 TSR2Q969E8 191 aaKnown RBP23.44■■□□□ 1.34
IRF3-231ENST00000602190 MPHOSPH8Q99549 860 aa23.44■■□□□ 1.34
IRF3-231ENST00000602190 TRIM17Q9Y577 477 aa23.44■■□□□ 1.34
IRF3-231ENST00000602190 SNAP23O00161 211 aa23.43■■□□□ 1.34
IRF3-231ENST00000602190 PPP1R12BO60237 982 aaPredicted RBP23.43■■□□□ 1.34
IRF3-231ENST00000602190 CAP1Q01518 475 aa23.43■■□□□ 1.34
IRF3-231ENST00000602190 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
IRF3-231ENST00000602190 FLIIQ13045 1269 aa23.42■■□□□ 1.34
IRF3-231ENST00000602190 TWISTNBQ3B726 338 aaPredicted RBP23.42■■□□□ 1.34
IRF3-231ENST00000602190 NCBP3Q53F19 620 aaKnown RBP23.42■■□□□ 1.34
IRF3-231ENST00000602190 PRMT6Q96LA8 375 aaPredicted RBP23.42■■□□□ 1.34
IRF3-231ENST00000602190 PTPN22Q9Y2R2 807 aa23.42■■□□□ 1.34
IRF3-231ENST00000602190 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
IRF3-231ENST00000602190 SLC4A2P04920 1241 aa23.41■■□□□ 1.34
IRF3-231ENST00000602190 ERO1AQ96HE7 468 aa23.41■■□□□ 1.34
IRF3-231ENST00000602190 PTPN18Q99952 460 aa23.41■■□□□ 1.34
IRF3-231ENST00000602190 IL16Q14005 1332 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 FOXO4P98177 505 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 CRHR2Q13324 411 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 SUPT20HL1Q3ZLR7 823 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 CFAP100Q494V2 611 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 HABP4Q5JVS0 413 aaKnown RBP23.4■■□□□ 1.34
IRF3-231ENST00000602190 NBPF12Q5TAG4 269 aaPredicted RBP23.4■■□□□ 1.34
IRF3-231ENST00000602190 DNAAF4Q8WXU2 420 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
IRF3-231ENST00000602190 FAM205AQ6ZU69 1335 aa23.39■■□□□ 1.34
IRF3-231ENST00000602190 WWC1Q8IX03 1113 aa23.39■■□□□ 1.33
IRF3-231ENST00000602190 ANKRD18BA2A2Z9 1011 aa23.38■■□□□ 1.33
IRF3-231ENST00000602190 TAF5LO75529 589 aa23.38■■□□□ 1.33
IRF3-231ENST00000602190 ANKRD13AQ8IZ07 590 aa23.38■■□□□ 1.33
IRF3-231ENST00000602190 MS4A4AQ96JQ5 239 aa23.38■■□□□ 1.33
IRF3-231ENST00000602190 KCNJ4P48050 445 aa23.37■■□□□ 1.33
IRF3-231ENST00000602190 IREB2P48200 963 aaKnown RBP23.37■■□□□ 1.33
IRF3-231ENST00000602190 ZNF804AQ7Z570 1209 aa23.37■■□□□ 1.33
IRF3-231ENST00000602190 CD99L2Q8TCZ2 262 aa23.37■■□□□ 1.33
IRF3-231ENST00000602190 TEPSINQ96N21 525 aa23.37■■□□□ 1.33
IRF3-231ENST00000602190 CLRN2A0PK11 232 aa23.36■■□□□ 1.33
IRF3-231ENST00000602190 MYO1BO43795 1136 aa23.36■■□□□ 1.33
IRF3-231ENST00000602190 RASA3Q14644 834 aa23.36■■□□□ 1.33
IRF3-231ENST00000602190 SPDYE2Q495Y8 402 aa23.36■■□□□ 1.33
IRF3-231ENST00000602190 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
IRF3-231ENST00000602190 HELBQ8NG08 1087 aaPredicted RBP23.35■■□□□ 1.33
IRF3-231ENST00000602190 SP3Q02447 781 aa23.34■■□□□ 1.33
IRF3-231ENST00000602190 BEND3Q5T5X7 828 aa23.34■■□□□ 1.33
IRF3-231ENST00000602190 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
IRF3-231ENST00000602190 EFCC1Q9HA90 598 aa23.34■■□□□ 1.33
IRF3-231ENST00000602190 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
IRF3-231ENST00000602190 FKBP5Q13451 457 aaPredicted RBP23.33■■□□□ 1.33
IRF3-231ENST00000602190 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.33■■□□□ 1.33
IRF3-231ENST00000602190 ZNF333Q96JL9 665 aa23.33■■□□□ 1.33
IRF3-231ENST00000602190 SERPINA10Q9UK55 444 aa23.33■■□□□ 1.33
IRF3-231ENST00000602190 VAMP4O75379 141 aa23.32■■□□□ 1.32
IRF3-231ENST00000602190 TNFAIP1Q13829 316 aa23.32■■□□□ 1.32
IRF3-231ENST00000602190 EPHA10Q5JZY3 1008 aa23.32■■□□□ 1.32
IRF3-231ENST00000602190 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
IRF3-231ENST00000602190 EN2P19622 333 aaPredicted RBP23.31■■□□□ 1.32
IRF3-231ENST00000602190 BRI3BPQ8WY22 251 aa23.31■■□□□ 1.32
IRF3-231ENST00000602190 OPTNQ96CV9 577 aa23.31■■□□□ 1.32
IRF3-231ENST00000602190 VEZTQ9HBM0 779 aa23.31■■□□□ 1.32
IRF3-231ENST00000602190 ZNF70Q9UC06 446 aaPredicted RBP23.31■■□□□ 1.32
IRF3-231ENST00000602190 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
IRF3-231ENST00000602190 CDAN1Q8IWY9 1227 aa23.3■■□□□ 1.32
IRF3-231ENST00000602190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.3■■□□□ 1.327e-6■□□□□ 9.2
IRF3-231ENST00000602190 ZSWIM8A7E2V4 1837 aa23.29■■□□□ 1.32
IRF3-231ENST00000602190 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
IRF3-231ENST00000602190 UBE4AQ14139 1066 aa23.29■■□□□ 1.32
IRF3-231ENST00000602190 CCDC184Q52MB2 194 aa23.28■■□□□ 1.32
IRF3-231ENST00000602190 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
IRF3-231ENST00000602190 ELP3Q9H9T3 547 aa23.28■■□□□ 1.32
IRF3-231ENST00000602190 CEP290O15078 2479 aa23.28■■□□□ 1.32
IRF3-231ENST00000602190 MFSD14BQ5SR56 506 aa23.27■■□□□ 1.32
IRF3-231ENST00000602190 DZIP1LQ8IYY4 767 aaKnown RBP23.27■■□□□ 1.32
IRF3-231ENST00000602190 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
IRF3-231ENST00000602190 ZNF594Q96JF6 807 aaPredicted RBP23.27■■□□□ 1.32
IRF3-231ENST00000602190 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
IRF3-231ENST00000602190 TDRD3Q9H7E2 651 aaKnown RBP23.27■■□□□ 1.32
IRF3-231ENST00000602190 JAG2Q9Y219 1238 aa23.27■■□□□ 1.32
IRF3-231ENST00000602190 VGLL4Q14135 290 aa23.26■■□□□ 1.31
IRF3-231ENST00000602190 LDHAL6AQ6ZMR3 332 aa23.26■■□□□ 1.31
IRF3-231ENST00000602190 ZCCHC17Q9NP64 241 aaKnown RBP23.26■■□□□ 1.31
IRF3-231ENST00000602190 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms