RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TRAF5O00463 557 aa20.76■□□□□ 0.91
SSBP4-213ENST00000602088 FMR1Q06787 632 aaKnown RBP eCLIP20.76■□□□□ 0.91
SSBP4-213ENST00000602088 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
SSBP4-213ENST00000602088 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
SSBP4-213ENST00000602088 GLIS2Q9BZE0 524 aaPredicted RBP20.76■□□□□ 0.91
SSBP4-213ENST00000602088 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
SSBP4-213ENST00000602088 JAG2Q9Y219 1238 aa20.76■□□□□ 0.91
SSBP4-213ENST00000602088 COG6Q9Y2V7 657 aa20.76■□□□□ 0.91
SSBP4-213ENST00000602088 TMEM88BA6NKF7 163 aa20.75■□□□□ 0.91
SSBP4-213ENST00000602088 SCARF1Q14162 830 aa20.75■□□□□ 0.91
SSBP4-213ENST00000602088 PDE3AQ14432 1141 aa20.75■□□□□ 0.91
SSBP4-213ENST00000602088 HDAC9Q9UKV0 1011 aa20.75■□□□□ 0.91
SSBP4-213ENST00000602088 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
SSBP4-213ENST00000602088 IQSEC3Q9UPP2 1182 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-213ENST00000602088 ASTN2O75129 1339 aaPredicted RBP20.75■□□□□ 0.91
SSBP4-213ENST00000602088 POLR2AP24928 1970 aaKnown RBP20.74■□□□□ 0.91
SSBP4-213ENST00000602088 TFCP2Q12800 502 aa20.74■□□□□ 0.91
SSBP4-213ENST00000602088 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
SSBP4-213ENST00000602088 DCPSQ96C86 337 aaKnown RBP20.74■□□□□ 0.91
SSBP4-213ENST00000602088 FRAT2O75474 233 aaPredicted RBP20.73■□□□□ 0.91
SSBP4-213ENST00000602088 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
SSBP4-213ENST00000602088 NBPF9Q3BBW0 867 aa20.73■□□□□ 0.91
SSBP4-213ENST00000602088 MFSD14BQ5SR56 506 aa20.73■□□□□ 0.91
SSBP4-213ENST00000602088 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
SSBP4-213ENST00000602088 USP48Q86UV5 1035 aa20.73■□□□□ 0.91
SSBP4-213ENST00000602088 GGA3Q9NZ52 723 aa20.73■□□□□ 0.91
SSBP4-213ENST00000602088 WNT10BO00744 389 aa20.72■□□□□ 0.91
SSBP4-213ENST00000602088 TIMM10P62072 90 aa20.72■□□□□ 0.91
SSBP4-213ENST00000602088 KRT26Q7Z3Y9 468 aa20.72■□□□□ 0.91
SSBP4-213ENST00000602088 ZBED3Q96IU2 234 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-213ENST00000602088 ZBTB40Q9NUA8 1239 aa20.72■□□□□ 0.91
SSBP4-213ENST00000602088 AKAP2Q9Y2D5 859 aa20.72■□□□□ 0.91
SSBP4-213ENST00000602088 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.72■□□□□ 0.91
SSBP4-213ENST00000602088 ANGEL2Q5VTE6 544 aaKnown RBP20.71■□□□□ 0.91
SSBP4-213ENST00000602088 CST9Q5W186 159 aa20.71■□□□□ 0.91
SSBP4-213ENST00000602088 KLRG1Q96E93 195 aa20.71■□□□□ 0.91
SSBP4-213ENST00000602088 TRPM7Q96QT4 1865 aa20.71■□□□□ 0.91
SSBP4-213ENST00000602088 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
SSBP4-213ENST00000602088 F8W031 263 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-213ENST00000602088 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-213ENST00000602088 DLK2Q6UY11 383 aa20.7■□□□□ 0.9
SSBP4-213ENST00000602088 MTMR14Q8NCE2 650 aa20.7■□□□□ 0.9
SSBP4-213ENST00000602088 TBC1D22AQ8WUA7 517 aa20.7■□□□□ 0.9
SSBP4-213ENST00000602088 CHMP4BQ9H444 224 aaKnown RBP20.7■□□□□ 0.9
SSBP4-213ENST00000602088 NOP58Q9Y2X3 529 aaKnown RBP20.7■□□□□ 0.9
SSBP4-213ENST00000602088 PITPNM2Q9BZ72 1349 aa20.7■□□□□ 0.9
SSBP4-213ENST00000602088 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
SSBP4-213ENST00000602088 ADORA1P30542 326 aa20.69■□□□□ 0.9
SSBP4-213ENST00000602088 SULF1Q8IWU6 871 aa20.69■□□□□ 0.9
SSBP4-213ENST00000602088 GNL3LQ9NVN8 582 aaKnown RBP20.69■□□□□ 0.9
SSBP4-213ENST00000602088 ARAP2Q8WZ64 1704 aa20.68■□□□□ 0.9
SSBP4-213ENST00000602088 ADM5C9JUS6 153 aa20.68■□□□□ 0.9
SSBP4-213ENST00000602088 ZBTB22O15209 634 aa20.68■□□□□ 0.9
SSBP4-213ENST00000602088 CELF2O95319 508 aaKnown RBP20.68■□□□□ 0.9
SSBP4-213ENST00000602088 PHKA1P46020 1223 aa20.68■□□□□ 0.9
SSBP4-213ENST00000602088 DLGAP5Q15398 846 aa20.68■□□□□ 0.9
SSBP4-213ENST00000602088 TTF2Q9UNY4 1162 aaKnown RBP20.68■□□□□ 0.9
SSBP4-213ENST00000602088 GRIK5Q16478 980 aa20.67■□□□□ 0.9
SSBP4-213ENST00000602088 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
SSBP4-213ENST00000602088 RPAP2Q8IXW5 612 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-213ENST00000602088 XAGE2Q96GT9 111 aa20.67■□□□□ 0.9
SSBP4-213ENST00000602088 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
SSBP4-213ENST00000602088 PCNTO95613 3336 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 SEMA3EO15041 775 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 OS9Q13438 667 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-213ENST00000602088 CFAP100Q494V2 611 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 WDR66Q8TBY9 1149 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 NEUROD6Q96NK8 337 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 SERPINA10Q9UK55 444 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 PCDHAC2Q9Y5I4 1007 aa20.66■□□□□ 0.9
SSBP4-213ENST00000602088 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 COL1A1P02452 1464 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-213ENST00000602088 SPDYE2BA6NHP3 402 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 SPDYE6P0CI01 402 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 PRMT6Q96LA8 375 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-213ENST00000602088 ZNF408Q9H9D4 720 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 MKRN1Q9UHC7 482 aaKnown RBP20.65■□□□□ 0.9
SSBP4-213ENST00000602088 ABT1Q9ULW3 272 aaKnown RBP20.65■□□□□ 0.9
SSBP4-213ENST00000602088 SUGT1Q9Y2Z0 365 aa20.65■□□□□ 0.9
SSBP4-213ENST00000602088 CNTNAP1P78357 1384 aa20.64■□□□□ 0.89
SSBP4-213ENST00000602088 RBM5P52756 815 aaKnown RBP eCLIP20.64■□□□□ 0.89
SSBP4-213ENST00000602088 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.89
SSBP4-213ENST00000602088 SIRT2Q8IXJ6 389 aa20.64■□□□□ 0.89
SSBP4-213ENST00000602088 JMYQ8N9B5 988 aa20.64■□□□□ 0.89
SSBP4-213ENST00000602088 DENND2AQ9ULE3 1009 aa20.64■□□□□ 0.89
SSBP4-213ENST00000602088 SCAF8Q9UPN6 1271 aaKnown RBP20.64■□□□□ 0.89
SSBP4-213ENST00000602088 TLL2Q9Y6L7 1015 aa20.64■□□□□ 0.89
SSBP4-213ENST00000602088 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
SSBP4-213ENST00000602088 DEFB115Q30KQ5 88 aa20.63■□□□□ 0.89
SSBP4-213ENST00000602088 CDCA5Q96FF9 252 aa20.63■□□□□ 0.89
SSBP4-213ENST00000602088 MRIQ9BWK5 157 aa20.63■□□□□ 0.89
SSBP4-213ENST00000602088 AOX1Q06278 1338 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 CRKP46108 304 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 RASGRF1Q13972 1273 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 TNNI3KQ59H18 835 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 SAPCD2Q86UD0 394 aa20.62■□□□□ 0.89
SSBP4-213ENST00000602088 APOBEC3FQ8IUX4 373 aaKnown RBP20.62■□□□□ 0.89
SSBP4-213ENST00000602088 EXOC6BQ9Y2D4 811 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms