RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 USP48Q86UV5 1035 aa21.81■■□□□ 1.08
IRF3-230ENST00000601809 KIAA0825Q8IV33 1275 aa21.81■■□□□ 1.08
IRF3-230ENST00000601809 PITPNM2Q9BZ72 1349 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 THSD7BQ9C0I4 1608 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 ADM5C9JUS6 153 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 WNT10BO00744 389 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 NBPF9Q3BBW0 867 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 LPIN2Q92539 896 aa21.8■■□□□ 1.08
IRF3-230ENST00000601809 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.8■■□□□ 1.08
IRF3-230ENST00000601809 COL1A1P02452 1464 aaPredicted RBP21.79■■□□□ 1.08
IRF3-230ENST00000601809 ZBTB22O15209 634 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 BCAMP50895 628 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 POLA2Q14181 598 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 ANGEL2Q5VTE6 544 aaKnown RBP21.79■■□□□ 1.08
IRF3-230ENST00000601809 KRT26Q7Z3Y9 468 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 FTSJ3Q8IY81 847 aaKnown RBP21.79■■□□□ 1.08
IRF3-230ENST00000601809 MTMR14Q8NCE2 650 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 PANK1Q8TE04 598 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 MKRN1Q9UHC7 482 aaKnown RBP21.79■■□□□ 1.08
IRF3-230ENST00000601809 RCAN3Q9UKA8 241 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 JAG2Q9Y219 1238 aa21.79■■□□□ 1.08
IRF3-230ENST00000601809 MYH13Q9UKX3 1938 aa21.78■■□□□ 1.08
IRF3-230ENST00000601809 OGFOD1Q8N543 542 aa21.78■■□□□ 1.08
IRF3-230ENST00000601809 DCPSQ96C86 337 aaKnown RBP21.78■■□□□ 1.08
IRF3-230ENST00000601809 TLL2Q9Y6L7 1015 aa21.78■■□□□ 1.08
IRF3-230ENST00000601809 CELF2O95319 508 aaKnown RBP21.77■■□□□ 1.08
IRF3-230ENST00000601809 IFIT1P09914 478 aaKnown RBP21.77■■□□□ 1.08
IRF3-230ENST00000601809 GRIK5Q16478 980 aa21.77■■□□□ 1.08
IRF3-230ENST00000601809 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
IRF3-230ENST00000601809 SSH3Q8TE77 659 aa21.77■■□□□ 1.08
IRF3-230ENST00000601809 CEP126Q9P2H0 1117 aa21.77■■□□□ 1.08
IRF3-230ENST00000601809 PCDHAC2Q9Y5I4 1007 aa21.77■■□□□ 1.08
IRF3-230ENST00000601809 SLC5A1P13866 664 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 ATP8B2P98198 1209 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 ATP2B3Q16720 1220 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 SAPCD2Q86UD0 394 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 IQSEC3Q9UPP2 1182 aaPredicted RBP21.76■■□□□ 1.07
IRF3-230ENST00000601809 AOX1Q06278 1338 aa21.76■■□□□ 1.07
IRF3-230ENST00000601809 VEGFBP49765 207 aa21.75■■□□□ 1.07
IRF3-230ENST00000601809 MFSD14BQ5SR56 506 aa21.75■■□□□ 1.07
IRF3-230ENST00000601809 C1orf115Q9H7X2 142 aa21.75■■□□□ 1.07
IRF3-230ENST00000601809 HDAC9Q9UKV0 1011 aa21.75■■□□□ 1.07
IRF3-230ENST00000601809 DEFB115Q30KQ5 88 aa21.74■■□□□ 1.07
IRF3-230ENST00000601809 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
IRF3-230ENST00000601809 TFCP2Q12800 502 aa21.73■■□□□ 1.07
IRF3-230ENST00000601809 CDCA5Q96FF9 252 aa21.73■■□□□ 1.07
IRF3-230ENST00000601809 HHIPL1Q96JK4 782 aa21.73■■□□□ 1.07
IRF3-230ENST00000601809 SPDYE2BA6NHP3 402 aa21.72■■□□□ 1.07
IRF3-230ENST00000601809 SPDYE6P0CI01 402 aa21.72■■□□□ 1.07
IRF3-230ENST00000601809 ADORA1P30542 326 aa21.72■■□□□ 1.07
IRF3-230ENST00000601809 MVPQ14764 893 aaKnown RBP21.72■■□□□ 1.07
IRF3-230ENST00000601809 CFAP100Q494V2 611 aa21.72■■□□□ 1.07
IRF3-230ENST00000601809 VPS37DQ86XT2 251 aa21.72■■□□□ 1.07
IRF3-230ENST00000601809 ABT1Q9ULW3 272 aaKnown RBP21.72■■□□□ 1.07
IRF3-230ENST00000601809 SCAF8Q9UPN6 1271 aaKnown RBP21.72■■□□□ 1.07
IRF3-230ENST00000601809 F8W031 263 aaPredicted RBP21.71■■□□□ 1.07
IRF3-230ENST00000601809 PHKA1P46020 1223 aa21.71■■□□□ 1.07
IRF3-230ENST00000601809 CEP85Q6P2H3 762 aa21.71■■□□□ 1.07
IRF3-230ENST00000601809 PRMT6Q96LA8 375 aaPredicted RBP21.71■■□□□ 1.07
IRF3-230ENST00000601809 SERPINA10Q9UK55 444 aa21.71■■□□□ 1.07
IRF3-230ENST00000601809 NOP58Q9Y2X3 529 aaKnown RBP21.71■■□□□ 1.07
IRF3-230ENST00000601809 PAPPA2Q9BXP8 1791 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 MS4A1P11836 297 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 TIMM10P62072 90 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 DLGAP5Q15398 846 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 TBC1D22AQ8WUA7 517 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 ZNF408Q9H9D4 720 aa21.7■■□□□ 1.06
IRF3-230ENST00000601809 A0A1B0GUL7 405 aa21.69■■□□□ 1.06
IRF3-230ENST00000601809 CHAF1AQ13111 956 aaPredicted RBP21.69■■□□□ 1.06
IRF3-230ENST00000601809 C20orf194Q5TEA3 1177 aa21.69■■□□□ 1.06
IRF3-230ENST00000601809 GBA2Q9HCG7 927 aaPredicted RBP21.69■■□□□ 1.06
IRF3-230ENST00000601809 TTF2Q9UNY4 1162 aaKnown RBP21.69■■□□□ 1.06
IRF3-230ENST00000601809 WDR33Q9C0J8 1336 aaKnown RBP21.69■■□□□ 1.06
IRF3-230ENST00000601809 HDLBPQ00341 1268 aaKnown RBP21.68■■□□□ 1.06
IRF3-230ENST00000601809 CCDC102BQ68D86 513 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 CYP4F22Q6NT55 531 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 MRIQ9BWK5 157 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 ZBTB40Q9NUA8 1239 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 COG6Q9Y2V7 657 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 SUGT1Q9Y2Z0 365 aa21.68■■□□□ 1.06
IRF3-230ENST00000601809 SSC5DA1L4H1 1573 aa21.67■■□□□ 1.06
IRF3-230ENST00000601809 SALL1Q9NSC2 1324 aa21.67■■□□□ 1.06
IRF3-230ENST00000601809 APOBEC3FQ8IUX4 373 aaKnown RBP21.67■■□□□ 1.06
IRF3-230ENST00000601809 XAGE2Q96GT9 111 aa21.67■■□□□ 1.06
IRF3-230ENST00000601809 CAPNS2Q96L46 248 aa21.67■■□□□ 1.06
IRF3-230ENST00000601809 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
IRF3-230ENST00000601809 PDS5AQ29RF7 1337 aaKnown RBP21.66■■□□□ 1.06
IRF3-230ENST00000601809 SEMA3EO15041 775 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 CRKP46108 304 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 G3BP1Q13283 466 aaKnown RBP eCLIP21.66■■□□□ 1.06
IRF3-230ENST00000601809 PDE3AQ14432 1141 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 WDR66Q8TBY9 1149 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 GPR108Q9NPR9 543 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 DDX19BQ9UMR2 479 aa21.66■■□□□ 1.06
IRF3-230ENST00000601809 FRAT2O75474 233 aaPredicted RBP21.65■■□□□ 1.06
IRF3-230ENST00000601809 SPDYE2Q495Y8 402 aa21.65■■□□□ 1.06
IRF3-230ENST00000601809 SIRT2Q8IXJ6 389 aa21.65■■□□□ 1.06
IRF3-230ENST00000601809 HSPA1AP0DMV8 641 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms