RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 F8W031 263 aaPredicted RBP15.85■□□□□ 0.13
USE1-209ENST00000601592 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
USE1-209ENST00000601592 HIRAP54198 1017 aaPredicted RBP15.85■□□□□ 0.13
USE1-209ENST00000601592 FBXO33Q7Z6M2 555 aa15.85■□□□□ 0.13
USE1-209ENST00000601592 TDRD7Q8NHU6 1098 aaKnown RBP15.85■□□□□ 0.13
USE1-209ENST00000601592 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
USE1-209ENST00000601592 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
USE1-209ENST00000601592 HDAC9Q9UKV0 1011 aa15.85■□□□□ 0.13
USE1-209ENST00000601592 SASH1O94885 1247 aa15.84■□□□□ 0.13
USE1-209ENST00000601592 RRP1P56182 461 aaKnown RBP15.84■□□□□ 0.13
USE1-209ENST00000601592 ZNF280AP59817 542 aaPredicted RBP15.84■□□□□ 0.13
USE1-209ENST00000601592 HTRA3P83110 453 aa15.84■□□□□ 0.13
USE1-209ENST00000601592 POLA2Q14181 598 aa15.84■□□□□ 0.13
USE1-209ENST00000601592 AKAP2Q9Y2D5 859 aa15.84■□□□□ 0.13
USE1-209ENST00000601592 A0A1B0GUL7 405 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 ADORA1P30542 326 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 TIMM10P62072 90 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 MFSD14BQ5SR56 506 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 CERS5Q8N5B7 392 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 NEUROD6Q96NK8 337 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 ZBTB40Q9NUA8 1239 aa15.83■□□□□ 0.12
USE1-209ENST00000601592 TRAF5O00463 557 aa15.82■□□□□ 0.12
USE1-209ENST00000601592 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
USE1-209ENST00000601592 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
USE1-209ENST00000601592 DCPSQ96C86 337 aaKnown RBP15.82■□□□□ 0.12
USE1-209ENST00000601592 GLIS2Q9BZE0 524 aaPredicted RBP15.82■□□□□ 0.12
USE1-209ENST00000601592 GNL3LQ9NVN8 582 aaKnown RBP15.82■□□□□ 0.12
USE1-209ENST00000601592 GGA3Q9NZ52 723 aa15.82■□□□□ 0.12
USE1-209ENST00000601592 FAM205AQ6ZU69 1335 aa15.82■□□□□ 0.12
USE1-209ENST00000601592 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
USE1-209ENST00000601592 PHKA1P46020 1223 aa15.81■□□□□ 0.12
USE1-209ENST00000601592 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
USE1-209ENST00000601592 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.12
USE1-209ENST00000601592 SCARF1Q14162 830 aa15.81■□□□□ 0.12
USE1-209ENST00000601592 GORABQ5T7V8 394 aa15.81■□□□□ 0.12
USE1-209ENST00000601592 PASKQ96RG2 1323 aa15.81■□□□□ 0.12
USE1-209ENST00000601592 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.81■□□□□ 0.12
USE1-209ENST00000601592 HMMRO75330 724 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 RBM5P52756 815 aaKnown RBP eCLIP15.8■□□□□ 0.12
USE1-209ENST00000601592 ANGEL2Q5VTE6 544 aaKnown RBP15.8■□□□□ 0.12
USE1-209ENST00000601592 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 KRT26Q7Z3Y9 468 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 XAGE2Q96GT9 111 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 ZNF408Q9H9D4 720 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 TTF2Q9UNY4 1162 aaKnown RBP15.8■□□□□ 0.12
USE1-209ENST00000601592 EXOC6BQ9Y2D4 811 aa15.8■□□□□ 0.12
USE1-209ENST00000601592 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
USE1-209ENST00000601592 ADM5C9JUS6 153 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 APBB1O00213 710 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 SULF1Q8IWU6 871 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 RPAP2Q8IXW5 612 aaPredicted RBP15.79■□□□□ 0.12
USE1-209ENST00000601592 TBC1D22AQ8WUA7 517 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 PGAP2Q9UHJ9 254 aa15.79■□□□□ 0.12
USE1-209ENST00000601592 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
USE1-209ENST00000601592 WNT10BO00744 389 aa15.78■□□□□ 0.12
USE1-209ENST00000601592 MMP14P50281 582 aa15.78■□□□□ 0.12
USE1-209ENST00000601592 CFAP100Q494V2 611 aa15.78■□□□□ 0.12
USE1-209ENST00000601592 SCAF8Q9UPN6 1271 aaKnown RBP15.78■□□□□ 0.12
USE1-209ENST00000601592 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
USE1-209ENST00000601592 MYH2Q9UKX2 1941 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 GRIK5Q16478 980 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 TNNI3KQ59H18 835 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 ERC1Q8IUD2 1116 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 WDR66Q8TBY9 1149 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 DENND2AQ9ULE3 1009 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 ABT1Q9ULW3 272 aaKnown RBP15.77■□□□□ 0.12
USE1-209ENST00000601592 PCDHAC2Q9Y5I4 1007 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 FPGT-TNNI3KV9GXZ4 949 aa15.77■□□□□ 0.12
USE1-209ENST00000601592 CELF2O95319 508 aaKnown RBP15.76■□□□□ 0.11
USE1-209ENST00000601592 HSP90AB4PQ58FF6 505 aa15.76■□□□□ 0.11
USE1-209ENST00000601592 DLK2Q6UY11 383 aa15.76■□□□□ 0.11
USE1-209ENST00000601592 SIRT2Q8IXJ6 389 aa15.76■□□□□ 0.11
USE1-209ENST00000601592 CRBNQ96SW2 442 aa15.76■□□□□ 0.11
USE1-209ENST00000601592 CEP350Q5VT06 3117 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 CLRN2A0PK11 232 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 SEMA3EO15041 775 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 MYO1BO43795 1136 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 RASGRF1Q13972 1273 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 DBNDD2Q9BQY9 259 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
USE1-209ENST00000601592 MAST3O60307 1309 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 MYO5AQ9Y4I1 1855 aaKnown RBP15.74■□□□□ 0.11
USE1-209ENST00000601592 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 CRKP46108 304 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
USE1-209ENST00000601592 VEZTQ9HBM0 779 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 IL1RAPL2Q9NP60 686 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 MKRN1Q9UHC7 482 aaKnown RBP15.74■□□□□ 0.11
USE1-209ENST00000601592 SERPINA10Q9UK55 444 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
USE1-209ENST00000601592 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms