RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 FMR1Q06787 632 aaKnown RBP eCLIP10.95□□□□□ -0.66
SSBP4-208ENST00000600628 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
SSBP4-208ENST00000600628 KIF4BQ2VIQ3 1234 aa10.95□□□□□ -0.66
SSBP4-208ENST00000600628 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
SSBP4-208ENST00000600628 AKAP11Q9UKA4 1901 aa10.95□□□□□ -0.66
SSBP4-208ENST00000600628 CNTNAP1P78357 1384 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 ASTN2O75129 1339 aaPredicted RBP10.94□□□□□ -0.66
SSBP4-208ENST00000600628 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 TRAF5O00463 557 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 WNT10BO00744 389 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 MS4A1P11836 297 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 BCAMP50895 628 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
SSBP4-208ENST00000600628 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
SSBP4-208ENST00000600628 CDC37L1Q7L3B6 337 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 FTSJ3Q8IY81 847 aaKnown RBP10.94□□□□□ -0.66
SSBP4-208ENST00000600628 MRIQ9BWK5 157 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SSBP4-208ENST00000600628 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
SSBP4-208ENST00000600628 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
SSBP4-208ENST00000600628 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
SSBP4-208ENST00000600628 SCARF1Q14162 830 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 GRIK5Q16478 980 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 NBPF9Q3BBW0 867 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 HHIPL1Q96JK4 782 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 GLIS2Q9BZE0 524 aaPredicted RBP10.93□□□□□ -0.66
SSBP4-208ENST00000600628 SIL1Q9H173 461 aa10.93□□□□□ -0.66
SSBP4-208ENST00000600628 SLC5A1P13866 664 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 HDLBPQ00341 1268 aaKnown RBP10.92□□□□□ -0.66
SSBP4-208ENST00000600628 ATP2B3Q16720 1220 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 C20orf194Q5TEA3 1177 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 KIAA0825Q8IV33 1275 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 GPR108Q9NPR9 543 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 SUGT1Q9Y2Z0 365 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 LAMB1P07942 1786 aa10.92□□□□□ -0.66
SSBP4-208ENST00000600628 AOX1Q06278 1338 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 SALL1Q9NSC2 1324 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 ADORA1P30542 326 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 TFCP2Q12800 502 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 DEFB115Q30KQ5 88 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 CAVIN4Q5BKX8 364 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 MFSD14BQ5SR56 506 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 DLK2Q6UY11 383 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 KRT26Q7Z3Y9 468 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 SAPCD2Q86UD0 394 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 USP48Q86UV5 1035 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 TBC1D22AQ8WUA7 517 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 DCPSQ96C86 337 aaKnown RBP10.91□□□□□ -0.66
SSBP4-208ENST00000600628 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 ABT1Q9ULW3 272 aaKnown RBP10.91□□□□□ -0.66
SSBP4-208ENST00000600628 DDX19BQ9UMR2 479 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 TLL2Q9Y6L7 1015 aa10.91□□□□□ -0.66
SSBP4-208ENST00000600628 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 A0A1B0GUL7 405 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 SEMA3EO15041 775 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 CELF2O95319 508 aaKnown RBP10.9□□□□□ -0.66
SSBP4-208ENST00000600628 PHKA1P46020 1223 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 VEGFBP49765 207 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 TIMM10P62072 90 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
SSBP4-208ENST00000600628 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 PRMT6Q96LA8 375 aaPredicted RBP10.9□□□□□ -0.66
SSBP4-208ENST00000600628 C1orf115Q9H7X2 142 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 COG6Q9Y2V7 657 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 PCDHAC2Q9Y5I4 1007 aa10.9□□□□□ -0.66
SSBP4-208ENST00000600628 ADM5C9JUS6 153 aa10.89□□□□□ -0.67
SSBP4-208ENST00000600628 ARID4AP29374 1257 aaPredicted RBP10.89□□□□□ -0.67
SSBP4-208ENST00000600628 RPAP2Q8IXW5 612 aaPredicted RBP10.89□□□□□ -0.67
SSBP4-208ENST00000600628 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
SSBP4-208ENST00000600628 HDAC9Q9UKV0 1011 aa10.89□□□□□ -0.67
SSBP4-208ENST00000600628 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
SSBP4-208ENST00000600628 AKAP2Q9Y2D5 859 aa10.89□□□□□ -0.67
SSBP4-208ENST00000600628 MYH2Q9UKX2 1941 aa10.89□□□□□ -0.67
SSBP4-208ENST00000600628 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
SSBP4-208ENST00000600628 SSC5DA1L4H1 1573 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 CFAP100Q494V2 611 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 APOBEC3HQ6NTF7 200 aaKnown RBP10.88□□□□□ -0.67
SSBP4-208ENST00000600628 HHIPL2Q6UWX4 724 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 SULF1Q8IWU6 871 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
SSBP4-208ENST00000600628 ZDHHC15Q96MV8 337 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 ZNF408Q9H9D4 720 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 JAG2Q9Y219 1238 aa10.88□□□□□ -0.67
SSBP4-208ENST00000600628 WDR33Q9C0J8 1336 aaKnown RBP10.87□□□□□ -0.67
SSBP4-208ENST00000600628 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
SSBP4-208ENST00000600628 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
SSBP4-208ENST00000600628 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
SSBP4-208ENST00000600628 DLGAP5Q15398 846 aa10.87□□□□□ -0.67
SSBP4-208ENST00000600628 VPS37DQ86XT2 251 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms