RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
HOMER3-211ENST00000599808 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
HOMER3-211ENST00000599808 CD209Q9NNX6 404 aa15.81■□□□□ 0.12
HOMER3-211ENST00000599808 IRS2Q9Y4H2 1338 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 SNAP23O00161 211 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 KCNJ4P48050 445 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 CHRNDQ07001 517 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 CD99L2Q8TCZ2 262 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 PPP2R3BQ9Y5P8 575 aa15.8■□□□□ 0.12
HOMER3-211ENST00000599808 AOX1Q06278 1338 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 CACNA1FO60840 1977 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 CLRN2A0PK11 232 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 CSF1RP07333 972 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 GJA5P36382 358 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 CASP7P55210 303 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 CRHR2Q13324 411 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 GCKRQ14397 625 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 TSR2Q969E8 191 aaKnown RBP15.79■□□□□ 0.12
HOMER3-211ENST00000599808 ERO1AQ96HE7 468 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
HOMER3-211ENST00000599808 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 UNCXA6NJT0 531 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 F8W031 263 aaPredicted RBP15.78■□□□□ 0.12
HOMER3-211ENST00000599808 TAF5LO75529 589 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 CAP1Q01518 475 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 CFAP100Q494V2 611 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 NBPF12Q5TAG4 269 aaPredicted RBP15.78■□□□□ 0.12
HOMER3-211ENST00000599808 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
HOMER3-211ENST00000599808 CEP290O15078 2479 aa15.78■□□□□ 0.12
HOMER3-211ENST00000599808 USP2O75604 605 aaPredicted RBP15.77■□□□□ 0.12
HOMER3-211ENST00000599808 SUPT20HL1Q3ZLR7 823 aa15.77■□□□□ 0.12
HOMER3-211ENST00000599808 C15orf52Q6ZUT6 534 aaKnown RBP15.77■□□□□ 0.12
HOMER3-211ENST00000599808 HELBQ8NG08 1087 aaPredicted RBP15.77■□□□□ 0.12
HOMER3-211ENST00000599808 ARMC5Q96C12 935 aa15.77■□□□□ 0.12
HOMER3-211ENST00000599808 PTPN18Q99952 460 aa15.77■□□□□ 0.12
HOMER3-211ENST00000599808 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
HOMER3-211ENST00000599808 VEZTQ9HBM0 779 aa15.77■□□□□ 0.12
HOMER3-211ENST00000599808 MYO1BO43795 1136 aa15.76■□□□□ 0.11
HOMER3-211ENST00000599808 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
HOMER3-211ENST00000599808 IL1R1P14778 569 aa15.76■□□□□ 0.11
HOMER3-211ENST00000599808 EN2P19622 333 aaPredicted RBP15.76■□□□□ 0.11
HOMER3-211ENST00000599808 IREB2P48200 963 aaKnown RBP15.76■□□□□ 0.11
HOMER3-211ENST00000599808 OTUD7BQ6GQQ9 843 aa15.76■□□□□ 0.11
HOMER3-211ENST00000599808 PRKRIP1Q9H875 184 aaPredicted RBP15.76■□□□□ 0.11
HOMER3-211ENST00000599808 ANKRD18BA2A2Z9 1011 aa15.75■□□□□ 0.11
HOMER3-211ENST00000599808 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
HOMER3-211ENST00000599808 FKBP1AP62942 108 aaKnown RBP15.75■□□□□ 0.11
HOMER3-211ENST00000599808 SP3Q02447 781 aa15.75■□□□□ 0.11
HOMER3-211ENST00000599808 RASA3Q14644 834 aa15.75■□□□□ 0.11
HOMER3-211ENST00000599808 ANKRD13AQ8IZ07 590 aa15.75■□□□□ 0.11
HOMER3-211ENST00000599808 JAG2Q9Y219 1238 aa15.75■□□□□ 0.11
HOMER3-211ENST00000599808 FLIIQ13045 1269 aa15.74■□□□□ 0.11
HOMER3-211ENST00000599808 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
HOMER3-211ENST00000599808 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
HOMER3-211ENST00000599808 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
HOMER3-211ENST00000599808 RBM5P52756 815 aaKnown RBP eCLIP15.73■□□□□ 0.11
HOMER3-211ENST00000599808 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 DNAAF4Q8WXU2 420 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 OPTNQ96CV9 577 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 MS4A4AQ96JQ5 239 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 ARAP2Q8WZ64 1704 aa15.73■□□□□ 0.11
HOMER3-211ENST00000599808 TRIOBPQ9H2D6 2365 aa15.72■□□□□ 0.11
HOMER3-211ENST00000599808 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
HOMER3-211ENST00000599808 FOXO4P98177 505 aa15.72■□□□□ 0.11
HOMER3-211ENST00000599808 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
HOMER3-211ENST00000599808 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
HOMER3-211ENST00000599808 ZNF333Q96JL9 665 aa15.72■□□□□ 0.11
HOMER3-211ENST00000599808 ZSWIM8A7E2V4 1837 aa15.72■□□□□ 0.11
HOMER3-211ENST00000599808 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 BRI3BPQ8WY22 251 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 TMEM106CQ9BVX2 250 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 CHMP3Q9Y3E7 222 aa15.71■□□□□ 0.11
HOMER3-211ENST00000599808 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
HOMER3-211ENST00000599808 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.7■□□□□ 0.1
HOMER3-211ENST00000599808 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
HOMER3-211ENST00000599808 TDRD3Q9H7E2 651 aaKnown RBP15.7■□□□□ 0.1
HOMER3-211ENST00000599808 ZNF70Q9UC06 446 aaPredicted RBP15.7■□□□□ 0.1
HOMER3-211ENST00000599808 PTCH2Q9Y6C5 1203 aa15.7■□□□□ 0.1
HOMER3-211ENST00000599808 SZT2Q5T011 3432 aa15.69■□□□□ 0.1
HOMER3-211ENST00000599808 FAM205AQ6ZU69 1335 aa15.69■□□□□ 0.1
HOMER3-211ENST00000599808 PLIN1O60240 522 aa15.69■□□□□ 0.1
HOMER3-211ENST00000599808 TAF1CQ15572 869 aaPredicted RBP15.69■□□□□ 0.1
HOMER3-211ENST00000599808 SLC9C1Q4G0N8 1177 aa15.69■□□□□ 0.1
HOMER3-211ENST00000599808 WWC1Q8IX03 1113 aa15.69■□□□□ 0.1
HOMER3-211ENST00000599808 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
HOMER3-211ENST00000599808 CCL15-CCL14A0A0B4J2E2 113 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 VGLL4Q14135 290 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 CCL15Q16663 113 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 CCDC27Q2M243 656 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 FAM43AQ8N2R8 423 aa15.68■□□□□ 0.1
HOMER3-211ENST00000599808 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
HOMER3-211ENST00000599808 ZFYVE28Q9HCC9 887 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms