RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 UAP1Q16222 522 aaPredicted RBP13.36□□□□□ -0.27
SCN8A-208ENST00000599343 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 GNAQP50148 359 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 CFAP157Q5JU67 520 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 COPS6Q7L5N1 327 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 MIGA1Q8NAN2 632 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 U2AF2P26368 475 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 SLC39A6Q13433 755 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 SETDB1Q15047 1291 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 NGLY1Q96IV0 654 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 MTRF1LQ9UGC7 380 aaKnown RBP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 VTI1AQ96AJ9 217 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
SCN8A-208ENST00000599343 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 ANKRD44Q8N8A2 993 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 FAM169AQ9Y6X4 670 aa13.35□□□□□ -0.27
SCN8A-208ENST00000599343 IL16Q14005 1332 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 TNNC1P63316 161 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 SNX21Q969T3 373 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 MRRFQ96E11 262 aaKnown RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 PPARDQ03181 441 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 CCDC122Q5T0U0 273 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 GTPBP4Q9BZE4 634 aaKnown RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 LUC7L2Q9Y383 392 aaKnown RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 GRM8O00222 908 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 MRPL50Q8N5N7 158 aaKnown RBP13.34□□□□□ -0.27
SCN8A-208ENST00000599343 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 TUBB4AP04350 444 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 KRBA2Q6ZNG9 492 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 HDXQ7Z353 690 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 SMC1BQ8NDV3 1235 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
SCN8A-208ENST00000599343 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.27
SCN8A-208ENST00000599343 PPP2R3AQ06190 1150 aa13.33□□□□□ -0.27
SCN8A-208ENST00000599343 NAA25Q14CX7 972 aa13.33□□□□□ -0.27
SCN8A-208ENST00000599343 C8orf34Q49A92 452 aa13.33□□□□□ -0.27
SCN8A-208ENST00000599343 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.27
SCN8A-208ENST00000599343 STIM2Q9P246 746 aa13.33□□□□□ -0.27
SCN8A-208ENST00000599343 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
SCN8A-208ENST00000599343 RNASE9P60153 205 aaKnown RBP13.33□□□□□ -0.28
SCN8A-208ENST00000599343 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 MAGEB6Q8N7X4 407 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 EVCP57679 992 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 SP4Q02446 784 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 INTS8Q75QN2 995 aaKnown RBP13.33□□□□□ -0.28
SCN8A-208ENST00000599343 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-208ENST00000599343 A0A1B0GVL5 298 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 CALCOCO2Q13137 446 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 SEL1L2Q5TEA6 688 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
SCN8A-208ENST00000599343 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 RPUSD2Q8IZ73 545 aaKnown RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ZKSCAN3Q9BRR0 538 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 RABEP2Q9H5N1 569 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 RNF113AO15541 343 aaKnown RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 KRT5P13647 590 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 LACTBP83111 547 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 TSGA10Q9BZW7 698 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 WDR70Q9NW82 654 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 OGFRQ9NZT2 677 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ABCC5O15440 1437 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 NSD2O96028 1365 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ACEP12821 1306 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 IL15P40933 162 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 RSRC1Q96IZ7 334 aaKnown RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 MAK16Q9BXY0 300 aaKnown RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 NOS1P29475 1434 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 CALML3P27482 149 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-208ENST00000599343 ZNF174Q15697 407 aa13.32□□□□□ -0.28
SCN8A-208ENST00000599343 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 SH3BP5O60239 455 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 RUFY3Q7L099 469 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
SCN8A-208ENST00000599343 MCM9Q9NXL9 1143 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 SEPT6Q14141 434 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 PPP1R21Q6ZMI0 780 aa13.31□□□□□ -0.28
SCN8A-208ENST00000599343 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms