RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 ASAP3Q8TDY4 903 aa11.05□□□□□ -0.64
LINC00343-208ENST00000599264 BHLHE41Q9C0J9 482 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-208ENST00000599264 TIMELESSQ9UNS1 1208 aa11.05□□□□□ -0.64
LINC00343-208ENST00000599264 UVSSAQ2YD98 709 aa11.04□□□□□ -0.64
LINC00343-208ENST00000599264 XP32Q5T750 250 aa11.04□□□□□ -0.64
LINC00343-208ENST00000599264 TM4SF5O14894 197 aa11.03□□□□□ -0.64
LINC00343-208ENST00000599264 DDX3YO15523 660 aaKnown RBP11.03□□□□□ -0.64
LINC00343-208ENST00000599264 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
LINC00343-208ENST00000599264 KIAA1211Q6ZU35 1233 aa11.03□□□□□ -0.64
LINC00343-208ENST00000599264 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-208ENST00000599264 SART1O43290 800 aaKnown RBP11.02□□□□□ -0.65
LINC00343-208ENST00000599264 ADAM11O75078 769 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 NLRP12P59046 1061 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 ARHGAP4P98171 946 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 PEAR1Q5VY43 1037 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-208ENST00000599264 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 UBL7Q96S82 380 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-208ENST00000599264 RNF208Q9H0X6 261 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 RAXQ9Y2V3 346 aa11.02□□□□□ -0.65
LINC00343-208ENST00000599264 GSC2O15499 205 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
LINC00343-208ENST00000599264 ECM1Q16610 540 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 ANKRD34AQ69YU3 496 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 VN1R5Q7Z5H4 357 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 UBASH3BQ8TF42 649 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 SOX17Q9H6I2 414 aaPredicted RBP11.01□□□□□ -0.65
LINC00343-208ENST00000599264 STOML1Q9UBI4 398 aa11.01□□□□□ -0.65
LINC00343-208ENST00000599264 UTP4Q969X6 686 aaKnown RBP11□□□□□ -0.65
LINC00343-208ENST00000599264 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
LINC00343-208ENST00000599264 LATS2Q9NRM7 1088 aa11□□□□□ -0.65
LINC00343-208ENST00000599264 SOX1O00570 391 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-208ENST00000599264 FSTP19883 344 aa10.99□□□□□ -0.65
LINC00343-208ENST00000599264 ZFP64Q9NPA5 681 aa10.99□□□□□ -0.65
LINC00343-208ENST00000599264 SCRIBQ14160 1630 aa10.98□□□□□ -0.65
LINC00343-208ENST00000599264 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
LINC00343-208ENST00000599264 ARTNQ5T4W7 220 aa10.98□□□□□ -0.65
LINC00343-208ENST00000599264 FDX2Q6P4F2 183 aa10.98□□□□□ -0.65
LINC00343-208ENST00000599264 FAM129BQ96TA1 746 aa10.98□□□□□ -0.65
LINC00343-208ENST00000599264 LIN7BQ9HAP6 207 aa10.98□□□□□ -0.65
LINC00343-208ENST00000599264 LRP8Q14114 963 aa10.97□□□□□ -0.65
LINC00343-208ENST00000599264 FAM46AQ96IP4 442 aaKnown RBP10.97□□□□□ -0.65
LINC00343-208ENST00000599264 RNF112Q9ULX5 631 aa10.97□□□□□ -0.65
LINC00343-208ENST00000599264 A0A1W2PP55 124 aa10.96□□□□□ -0.65
LINC00343-208ENST00000599264 ESRRAP11474 423 aaPredicted RBP10.96□□□□□ -0.65
LINC00343-208ENST00000599264 CCNJLQ8IV13 435 aa10.96□□□□□ -0.65
LINC00343-208ENST00000599264 A0A096LPE4 126 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 MEGF11A6BM72 1044 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 BRD1O95696 1058 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 NUTM2GQ5VZR2 741 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 ARMC10Q8N2F6 343 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 MYRFLQ96LU7 910 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 DMRTB1Q96MA1 342 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 USP26Q9BXU7 913 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 DNAJC25Q9H1X3 360 aa10.95□□□□□ -0.66
LINC00343-208ENST00000599264 METTL12A8MUP2 240 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 GSTM4Q03013 218 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 KIAA0319Q5VV43 1072 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 DDX54Q8TDD1 881 aaKnown RBP10.94□□□□□ -0.66
LINC00343-208ENST00000599264 CLEC4MQ9H2X3 399 aaPredicted RBP10.94□□□□□ -0.66
LINC00343-208ENST00000599264 CYP4F12Q9HCS2 524 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 HIF3AQ9Y2N7 669 aa10.94□□□□□ -0.66
LINC00343-208ENST00000599264 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
LINC00343-208ENST00000599264 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
LINC00343-208ENST00000599264 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
LINC00343-208ENST00000599264 EHD4Q9H223 541 aa10.93□□□□□ -0.66
LINC00343-208ENST00000599264 SOWAHDA6NJG2 315 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 PCDH1Q08174 1060 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 ORC1Q13415 861 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.92□□□□□ -0.66
LINC00343-208ENST00000599264 TCF12Q99081 682 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 RBCK1Q9BYM8 510 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 ZFYVE1Q9HBF4 777 aa10.92□□□□□ -0.66
LINC00343-208ENST00000599264 BIN2Q9UBW5 565 aaPredicted RBP10.92□□□□□ -0.66
LINC00343-208ENST00000599264 GNEQ9Y223 722 aaKnown RBP10.92□□□□□ -0.66
LINC00343-208ENST00000599264 BMP3P12645 472 aa10.91□□□□□ -0.66
LINC00343-208ENST00000599264 HP1BP3Q5SSJ5 553 aaPredicted RBP10.91□□□□□ -0.66
LINC00343-208ENST00000599264 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
LINC00343-208ENST00000599264 C12orf50Q8NA57 414 aaPredicted RBP10.91□□□□□ -0.66
LINC00343-208ENST00000599264 KCNF1Q9H3M0 494 aa10.91□□□□□ -0.66
LINC00343-208ENST00000599264 LOC100289279A0A1B0GTE1 492 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 EIF1AYO14602 144 aaKnown RBP10.9□□□□□ -0.66
LINC00343-208ENST00000599264 CYP11A1P05108 521 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 GRIA4P48058 902 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 PREPP48147 710 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 EXOSC6Q5RKV6 272 aaKnown RBP10.9□□□□□ -0.66
LINC00343-208ENST00000599264 FAM20CQ8IXL6 584 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 NPHS2Q9NP85 383 aa10.9□□□□□ -0.66
LINC00343-208ENST00000599264 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
LINC00343-208ENST00000599264 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
LINC00343-208ENST00000599264 SMG8Q8ND04 991 aaKnown RBP10.89□□□□□ -0.67
LINC00343-208ENST00000599264 ALKBH8Q96BT7 664 aaKnown RBP10.89□□□□□ -0.67
LINC00343-208ENST00000599264 FAM83CQ9BQN1 747 aa10.89□□□□□ -0.67
LINC00343-208ENST00000599264 TMPRSS13Q9BYE2 586 aa10.89□□□□□ -0.67
LINC00343-208ENST00000599264 SUGCTQ9HAC7 445 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms