RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CLDN10P78369 228 aa13.61□□□□□ -0.23
SMG9-207ENST00000598860 ANKMY2Q8IV38 441 aa13.61□□□□□ -0.23
SMG9-207ENST00000598860 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
SMG9-207ENST00000598860 AGBL1Q96MI9 1066 aa13.61□□□□□ -0.23
SMG9-207ENST00000598860 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
SMG9-207ENST00000598860 MEGF6O75095 1541 aa13.6□□□□□ -0.23
SMG9-207ENST00000598860 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
SMG9-207ENST00000598860 ATP1A2P50993 1020 aa13.6□□□□□ -0.23
SMG9-207ENST00000598860 USP4Q13107 963 aa13.6□□□□□ -0.23
SMG9-207ENST00000598860 ADH1AP07327 375 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 TXNRD1Q16881 649 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 SULT6B1Q6IMI4 303 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 LINC00528Q8N1L1 170 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
SMG9-207ENST00000598860 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
SMG9-207ENST00000598860 OSBPL3Q9H4L5 887 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
SMG9-207ENST00000598860 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
SMG9-207ENST00000598860 UPP2O95045 317 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 RELBQ01201 579 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 DPYDQ12882 1025 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 C6orf118Q5T5N4 469 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 PURBQ96QR8 312 aaKnown RBP13.58□□□□□ -0.24
SMG9-207ENST00000598860 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
SMG9-207ENST00000598860 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
SMG9-207ENST00000598860 RREB1Q92766 1687 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 HMOX1P09601 288 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 RGPD3A6NKT7 1758 aaPredicted RBP13.57□□□□□ -0.24
SMG9-207ENST00000598860 RGPD4Q7Z3J3 1758 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
SMG9-207ENST00000598860 NHSQ6T4R5 1651 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 BMP2P12643 396 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 MFAP1P55081 439 aaKnown RBP13.56□□□□□ -0.24
SMG9-207ENST00000598860 SCARF1Q14162 830 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 LARGE2Q8N3Y3 721 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 KIAA1024Q9UPX6 916 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
SMG9-207ENST00000598860 CYP27B1O15528 508 aa13.55□□□□□ -0.24
SMG9-207ENST00000598860 GTF2IP78347 998 aa13.55□□□□□ -0.24
SMG9-207ENST00000598860 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
SMG9-207ENST00000598860 KDF1Q8NAX2 398 aaPredicted RBP13.55□□□□□ -0.24
SMG9-207ENST00000598860 CLP1Q92989 425 aaKnown RBP13.55□□□□□ -0.24
SMG9-207ENST00000598860 ZFP42Q96MM3 310 aa13.55□□□□□ -0.24
SMG9-207ENST00000598860 ZNF395Q9H8N7 513 aaPredicted RBP13.55□□□□□ -0.24
SMG9-207ENST00000598860 GMPR2Q9P2T1 348 aaKnown RBP13.55□□□□□ -0.24
SMG9-207ENST00000598860 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
SMG9-207ENST00000598860 PTGIRP43119 386 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 PHLDB3Q6NSJ2 640 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 CYP2U1Q7Z449 544 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 SIX5Q8N196 739 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 GNEQ9Y223 722 aaKnown RBP13.54□□□□□ -0.24
SMG9-207ENST00000598860 BTAF1O14981 1849 aa13.54□□□□□ -0.24
SMG9-207ENST00000598860 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
SMG9-207ENST00000598860 DKK1O94907 266 aa13.53□□□□□ -0.24
SMG9-207ENST00000598860 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
SMG9-207ENST00000598860 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
SMG9-207ENST00000598860 SSFA2P28290 1259 aa13.52□□□□□ -0.25
SMG9-207ENST00000598860 SWI5Q1ZZU3 235 aa13.52□□□□□ -0.25
SMG9-207ENST00000598860 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
SMG9-207ENST00000598860 IFNL2Q8IZJ0 200 aa13.52□□□□□ -0.25
SMG9-207ENST00000598860 ADAMTS7Q9UKP4 1686 aa13.52□□□□□ -0.25
SMG9-207ENST00000598860 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG9-207ENST00000598860 LMOD3Q0VAK6 560 aa13.51□□□□□ -0.25
SMG9-207ENST00000598860 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
SMG9-207ENST00000598860 SLC15A2Q16348 729 aa13.51□□□□□ -0.25
SMG9-207ENST00000598860 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
SMG9-207ENST00000598860 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 APAF1O14727 1248 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 PHKG2P15735 406 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 TMPOP42166 694 aaKnown RBP13.5□□□□□ -0.25
SMG9-207ENST00000598860 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 SENP2Q9HC62 589 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 PCDHGA11Q9Y5H2 935 aa13.5□□□□□ -0.25
SMG9-207ENST00000598860 ZBED9Q6R2W3 1325 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 POTECB2RU33 542 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 SPINT1O43278 529 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 SND1Q7KZF4 910 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMG9-207ENST00000598860 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 SPON1Q9HCB6 807 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 ARHGEF10LQ9HCE6 1279 aa13.49□□□□□ -0.25
SMG9-207ENST00000598860 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 MAP3K5Q99683 1374 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 SEC13P55735 322 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 KCNQ4P56696 695 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms