RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 USP17L8P0C7I0 530 aa16.8■□□□□ 0.28
SOX2-OT-229ENST00000598474 TIMM10P62072 90 aa16.8■□□□□ 0.28
SOX2-OT-229ENST00000598474 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
SOX2-OT-229ENST00000598474 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
SOX2-OT-229ENST00000598474 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-229ENST00000598474 KIAA0825Q8IV33 1275 aa16.79■□□□□ 0.28
SOX2-OT-229ENST00000598474 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
SOX2-OT-229ENST00000598474 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SOX2-OT-229ENST00000598474 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-229ENST00000598474 PHKA1P46020 1223 aa16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 FKBP1AP62942 108 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 CHAF1AQ13111 956 aaPredicted RBP16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
SOX2-OT-229ENST00000598474 FRAT2O75474 233 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 HSPA6P17066 643 aa16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 CCDC102BQ68D86 513 aa16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 XAGE2Q96GT9 111 aa16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
SOX2-OT-229ENST00000598474 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 ASTN2O75129 1339 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 HMMRO75330 724 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 GRIK5Q16478 980 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 GPR108Q9NPR9 543 aa16.76■□□□□ 0.27
SOX2-OT-229ENST00000598474 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 F8W031 263 aaPredicted RBP16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
SOX2-OT-229ENST00000598474 SCARF1Q14162 830 aa16.74■□□□□ 0.27
SOX2-OT-229ENST00000598474 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-229ENST00000598474 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
SOX2-OT-229ENST00000598474 WNT10BO00744 389 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 ZBTB22O15209 634 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 MMP14P50281 582 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 GLIS2Q9BZE0 524 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
SOX2-OT-229ENST00000598474 TRAF5O00463 557 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 SEMA3EO15041 775 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 APLP1P51693 650 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 DENND2AQ9ULE3 1009 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SOX2-OT-229ENST00000598474 APBB1O00213 710 aa16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 HTRA3P83110 453 aa16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 DBNLQ9UJU6 430 aaKnown RBP16.71■□□□□ 0.27
SOX2-OT-229ENST00000598474 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 ADM5C9JUS6 153 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 ARID4AP29374 1257 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 DLK2Q6UY11 383 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 AOX1Q06278 1338 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
SOX2-OT-229ENST00000598474 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 DLGAP5Q15398 846 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 KRT26Q7Z3Y9 468 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 AACSQ86V21 672 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 HMG20BQ9P0W2 317 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 SERPINA10Q9UK55 444 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 SCAF8Q9UPN6 1271 aaKnown RBP16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
SOX2-OT-229ENST00000598474 PRDX5P30044 214 aa16.68■□□□□ 0.26
SOX2-OT-229ENST00000598474 MCAMP43121 646 aa16.68■□□□□ 0.26
SOX2-OT-229ENST00000598474 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
SOX2-OT-229ENST00000598474 PRMT6Q96LA8 375 aaPredicted RBP16.68■□□□□ 0.26
SOX2-OT-229ENST00000598474 PITPNM2Q9BZ72 1349 aa16.68■□□□□ 0.26
SOX2-OT-229ENST00000598474 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms