RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 PHKA1P46020 1223 aa20.69■□□□□ 0.9
CAPN12-206ENST00000597354 C1QTNF8P60827 252 aa20.69■□□□□ 0.9
CAPN12-206ENST00000597354 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
CAPN12-206ENST00000597354 CERS5Q8N5B7 392 aa20.69■□□□□ 0.9
CAPN12-206ENST00000597354 RBM46Q8TBY0 533 aaKnown RBP20.69■□□□□ 0.9
CAPN12-206ENST00000597354 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
CAPN12-206ENST00000597354 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
CAPN12-206ENST00000597354 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
CAPN12-206ENST00000597354 PNMA8AQ86V59 439 aaPredicted RBP20.68■□□□□ 0.9
CAPN12-206ENST00000597354 PCDHB15Q9Y5E8 787 aa20.68■□□□□ 0.9
CAPN12-206ENST00000597354 ZNF609O15014 1411 aa20.68■□□□□ 0.9
CAPN12-206ENST00000597354 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
CAPN12-206ENST00000597354 TNNI3KQ59H18 835 aa20.67■□□□□ 0.9
CAPN12-206ENST00000597354 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
CAPN12-206ENST00000597354 USP50Q70EL3 339 aaPredicted RBP20.67■□□□□ 0.9
CAPN12-206ENST00000597354 EXOC6Q8TAG9 804 aa20.67■□□□□ 0.9
CAPN12-206ENST00000597354 FPGT-TNNI3KV9GXZ4 949 aa20.67■□□□□ 0.9
CAPN12-206ENST00000597354 GORABQ5T7V8 394 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 MAP1SQ66K74 1059 aaPredicted RBP20.66■□□□□ 0.9
CAPN12-206ENST00000597354 CHADLQ6NUI6 762 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 LDHDQ86WU2 507 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 SMC1BQ8NDV3 1235 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 IL1RAPL2Q9NP60 686 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 FAM205AQ6ZU69 1335 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 ARAP2Q8WZ64 1704 aa20.66■□□□□ 0.9
CAPN12-206ENST00000597354 MYO3BQ8WXR4 1341 aa20.65■□□□□ 0.9
CAPN12-206ENST00000597354 MFSD14BQ5SR56 506 aa20.65■□□□□ 0.9
CAPN12-206ENST00000597354 CCDC8Q9H0W5 538 aaPredicted RBP20.65■□□□□ 0.9
CAPN12-206ENST00000597354 GNL3LQ9NVN8 582 aaKnown RBP20.65■□□□□ 0.9
CAPN12-206ENST00000597354 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
CAPN12-206ENST00000597354 GRIK5Q16478 980 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 KIF4BQ2VIQ3 1234 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 HSP90AB4PQ58FF6 505 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 ERC1Q8IUD2 1116 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 RHPN1Q8TCX5 695 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 DBNDD2Q9BQY9 259 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 GPR108Q9NPR9 543 aa20.64■□□□□ 0.89
CAPN12-206ENST00000597354 COL1A1P02452 1464 aaPredicted RBP20.63■□□□□ 0.89
CAPN12-206ENST00000597354 OGFOD1Q8N543 542 aa20.63■□□□□ 0.89
CAPN12-206ENST00000597354 EAF2Q96CJ1 260 aaPredicted RBP20.63■□□□□ 0.89
CAPN12-206ENST00000597354 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
CAPN12-206ENST00000597354 ADAMTSL1Q8N6G6 1762 aa20.63■□□□□ 0.89
CAPN12-206ENST00000597354 MYH13Q9UKX3 1938 aa20.63■□□□□ 0.89
CAPN12-206ENST00000597354 ASTN2O75129 1339 aaPredicted RBP20.62■□□□□ 0.89
CAPN12-206ENST00000597354 FSTL1Q12841 308 aa20.62■□□□□ 0.89
CAPN12-206ENST00000597354 HDAC9Q9UKV0 1011 aa20.62■□□□□ 0.89
CAPN12-206ENST00000597354 FKBP1AP62942 108 aaKnown RBP20.61■□□□□ 0.89
CAPN12-206ENST00000597354 RASGRF1Q13972 1273 aa20.61■□□□□ 0.89
CAPN12-206ENST00000597354 AACSQ86V21 672 aa20.61■□□□□ 0.89
CAPN12-206ENST00000597354 KIF1BPQ96EK5 621 aa20.61■□□□□ 0.89
CAPN12-206ENST00000597354 PCDHAC2Q9Y5I4 1007 aa20.61■□□□□ 0.89
CAPN12-206ENST00000597354 SMARCA5O60264 1052 aaPredicted RBP20.6■□□□□ 0.89
CAPN12-206ENST00000597354 RAB11FIP3O75154 756 aa20.6■□□□□ 0.89
CAPN12-206ENST00000597354 SCARF1Q14162 830 aa20.6■□□□□ 0.89
CAPN12-206ENST00000597354 TTC39AQ5SRH9 613 aa20.6■□□□□ 0.89
CAPN12-206ENST00000597354 CNTROBQ8N137 903 aa20.6■□□□□ 0.89
CAPN12-206ENST00000597354 DBNLQ9UJU6 430 aaKnown RBP20.6■□□□□ 0.89
CAPN12-206ENST00000597354 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
CAPN12-206ENST00000597354 TTF2Q9UNY4 1162 aaKnown RBP20.6■□□□□ 0.89
CAPN12-206ENST00000597354 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
CAPN12-206ENST00000597354 NBPF9Q3BBW0 867 aa20.59■□□□□ 0.89
CAPN12-206ENST00000597354 PI16Q6UXB8 463 aa20.59■□□□□ 0.89
CAPN12-206ENST00000597354 TBC1D22AQ8WUA7 517 aa20.59■□□□□ 0.89
CAPN12-206ENST00000597354 RBM5P52756 815 aaKnown RBP eCLIP20.58■□□□□ 0.89
CAPN12-206ENST00000597354 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.89
CAPN12-206ENST00000597354 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
CAPN12-206ENST00000597354 DCTPP1Q9H773 170 aa20.58■□□□□ 0.89
CAPN12-206ENST00000597354 SNRKQ9NRH2 765 aa20.58■□□□□ 0.89
CAPN12-206ENST00000597354 HMG20BQ9P0W2 317 aa20.58■□□□□ 0.89
CAPN12-206ENST00000597354 SCAF8Q9UPN6 1271 aaKnown RBP20.58■□□□□ 0.89
CAPN12-206ENST00000597354 TRAF5O00463 557 aa20.57■□□□□ 0.88
CAPN12-206ENST00000597354 SEMA3EO15041 775 aa20.57■□□□□ 0.88
CAPN12-206ENST00000597354 ITGBL1O95965 494 aaPredicted RBP20.57■□□□□ 0.88
CAPN12-206ENST00000597354 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
CAPN12-206ENST00000597354 DLK2Q6UY11 383 aa20.57■□□□□ 0.88
CAPN12-206ENST00000597354 CLASRPQ8N2M8 674 aaKnown RBP20.57■□□□□ 0.88
CAPN12-206ENST00000597354 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
CAPN12-206ENST00000597354 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
CAPN12-206ENST00000597354 WNT10BO00744 389 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 UQCRFS1P1P0C7P4 283 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
CAPN12-206ENST00000597354 MCAMP43121 646 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 ANGEL2Q5VTE6 544 aaKnown RBP20.56■□□□□ 0.88
CAPN12-206ENST00000597354 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 ZC3H15Q8WU90 426 aaKnown RBP20.56■□□□□ 0.88
CAPN12-206ENST00000597354 LRRCC1Q9C099 1032 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 ABCF2Q9UG63 623 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 PGAP2Q9UHJ9 254 aa20.56■□□□□ 0.88
CAPN12-206ENST00000597354 POLR2AP24928 1970 aaKnown RBP20.55■□□□□ 0.88
CAPN12-206ENST00000597354 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
CAPN12-206ENST00000597354 PRDX5P30044 214 aa20.55■□□□□ 0.88
CAPN12-206ENST00000597354 TBC1D9Q6ZT07 1266 aa20.55■□□□□ 0.88
CAPN12-206ENST00000597354 DCPSQ96C86 337 aaKnown RBP20.55■□□□□ 0.88
CAPN12-206ENST00000597354 AOX1Q06278 1338 aa20.54■□□□□ 0.88
CAPN12-206ENST00000597354 ADM5C9JUS6 153 aa20.54■□□□□ 0.88
CAPN12-206ENST00000597354 HSPA6P17066 643 aa20.54■□□□□ 0.88
CAPN12-206ENST00000597354 CRKP46108 304 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms