RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 COL1A1P02452 1464 aaPredicted RBP18.55■□□□□ 0.56
SCN1B-204ENST00000596348 USP17L8P0C7I0 530 aa18.55■□□□□ 0.56
SCN1B-204ENST00000596348 TIMM10P62072 90 aa18.55■□□□□ 0.56
SCN1B-204ENST00000596348 MAP1SQ66K74 1059 aaPredicted RBP18.55■□□□□ 0.56
SCN1B-204ENST00000596348 VPS37DQ86XT2 251 aa18.55■□□□□ 0.56
SCN1B-204ENST00000596348 RPAP2Q8IXW5 612 aaPredicted RBP18.55■□□□□ 0.56
SCN1B-204ENST00000596348 CLEC11AQ9Y240 323 aa18.55■□□□□ 0.56
SCN1B-204ENST00000596348 POLR2AP24928 1970 aaKnown RBP18.54■□□□□ 0.56
SCN1B-204ENST00000596348 A0A1B0GUL7 405 aa18.54■□□□□ 0.56
SCN1B-204ENST00000596348 RBM26Q5T8P6 1007 aaKnown RBP18.54■□□□□ 0.56
SCN1B-204ENST00000596348 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
SCN1B-204ENST00000596348 PHKA1P46020 1223 aa18.53■□□□□ 0.56
SCN1B-204ENST00000596348 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
SCN1B-204ENST00000596348 KIF4BQ2VIQ3 1234 aa18.53■□□□□ 0.56
SCN1B-204ENST00000596348 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
SCN1B-204ENST00000596348 EXOC6BQ9Y2D4 811 aa18.53■□□□□ 0.56
SCN1B-204ENST00000596348 AKAP2Q9Y2D5 859 aa18.53■□□□□ 0.56
SCN1B-204ENST00000596348 ASTN2O75129 1339 aaPredicted RBP18.52■□□□□ 0.56
SCN1B-204ENST00000596348 ITGBL1O95965 494 aaPredicted RBP18.52■□□□□ 0.56
SCN1B-204ENST00000596348 HSPA6P17066 643 aa18.52■□□□□ 0.56
SCN1B-204ENST00000596348 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.56
SCN1B-204ENST00000596348 CHAF1AQ13111 956 aaPredicted RBP18.52■□□□□ 0.56
SCN1B-204ENST00000596348 XAGE2Q96GT9 111 aa18.52■□□□□ 0.56
SCN1B-204ENST00000596348 MYOZ2Q9NPC6 264 aa18.52■□□□□ 0.56
SCN1B-204ENST00000596348 PGAP2Q9UHJ9 254 aa18.52■□□□□ 0.56
SCN1B-204ENST00000596348 GRIK5Q16478 980 aa18.51■□□□□ 0.55
SCN1B-204ENST00000596348 MFSD14BQ5SR56 506 aa18.51■□□□□ 0.55
SCN1B-204ENST00000596348 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
SCN1B-204ENST00000596348 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
SCN1B-204ENST00000596348 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 HMMRO75330 724 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 FRAT2O75474 233 aaPredicted RBP18.5■□□□□ 0.55
SCN1B-204ENST00000596348 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 ZC3H15Q8WU90 426 aaKnown RBP18.5■□□□□ 0.55
SCN1B-204ENST00000596348 NEUROD6Q96NK8 337 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
SCN1B-204ENST00000596348 F8W031 263 aaPredicted RBP18.49■□□□□ 0.55
SCN1B-204ENST00000596348 FMR1Q06787 632 aaKnown RBP eCLIP18.49■□□□□ 0.55
SCN1B-204ENST00000596348 OGFOD1Q8N543 542 aa18.49■□□□□ 0.55
SCN1B-204ENST00000596348 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
SCN1B-204ENST00000596348 TRAF5O00463 557 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 SCARF1Q14162 830 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 NBPF9Q3BBW0 867 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 ZBED3Q96IU2 234 aaPredicted RBP18.48■□□□□ 0.55
SCN1B-204ENST00000596348 GLIS2Q9BZE0 524 aaPredicted RBP18.48■□□□□ 0.55
SCN1B-204ENST00000596348 GGA3Q9NZ52 723 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 PCDHB15Q9Y5E8 787 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 PCDHAC2Q9Y5I4 1007 aa18.48■□□□□ 0.55
SCN1B-204ENST00000596348 ZBTB22O15209 634 aa18.47■□□□□ 0.55
SCN1B-204ENST00000596348 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
SCN1B-204ENST00000596348 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
SCN1B-204ENST00000596348 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
SCN1B-204ENST00000596348 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
SCN1B-204ENST00000596348 HDAC9Q9UKV0 1011 aa18.47■□□□□ 0.55
SCN1B-204ENST00000596348 WNT10BO00744 389 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 SEMA3EO15041 775 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 MMP14P50281 582 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 APLP1P51693 650 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 HTRA3P83110 453 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 HSP90AB4PQ58FF6 505 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 DLK2Q6UY11 383 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 TBC1D22AQ8WUA7 517 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 EAF2Q96CJ1 260 aaPredicted RBP18.46■□□□□ 0.55
SCN1B-204ENST00000596348 DBNLQ9UJU6 430 aaKnown RBP18.46■□□□□ 0.55
SCN1B-204ENST00000596348 TTF2Q9UNY4 1162 aaKnown RBP18.46■□□□□ 0.55
SCN1B-204ENST00000596348 AOX1Q06278 1338 aa18.46■□□□□ 0.55
SCN1B-204ENST00000596348 TRPM7Q96QT4 1865 aa18.46■□□□□ 0.54
SCN1B-204ENST00000596348 APBB1O00213 710 aa18.45■□□□□ 0.54
SCN1B-204ENST00000596348 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
SCN1B-204ENST00000596348 WDR66Q8TBY9 1149 aa18.45■□□□□ 0.54
SCN1B-204ENST00000596348 IL1RAPL2Q9NP60 686 aa18.45■□□□□ 0.54
SCN1B-204ENST00000596348 DENND2AQ9ULE3 1009 aa18.45■□□□□ 0.54
SCN1B-204ENST00000596348 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
SCN1B-204ENST00000596348 ECM29Q5VYK3 1845 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 ARID4AP29374 1257 aaPredicted RBP18.44■□□□□ 0.54
SCN1B-204ENST00000596348 CFAP100Q494V2 611 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 PI16Q6UXB8 463 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 KRT26Q7Z3Y9 468 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 MTMR14Q8NCE2 650 aa18.44■□□□□ 0.54
SCN1B-204ENST00000596348 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
SCN1B-204ENST00000596348 PDS5AQ29RF7 1337 aaKnown RBP18.44■□□□□ 0.54
SCN1B-204ENST00000596348 SPDYE2BA6NHP3 402 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 ADM5C9JUS6 153 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 SPDYE6P0CI01 402 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 PRDX5P30044 214 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 DLGAP5Q15398 846 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 CDC37L1Q7L3B6 337 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 DCPSQ96C86 337 aaKnown RBP18.43■□□□□ 0.54
SCN1B-204ENST00000596348 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 HMG20BQ9P0W2 317 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 SCAF8Q9UPN6 1271 aaKnown RBP18.43■□□□□ 0.54
SCN1B-204ENST00000596348 SALL1Q9NSC2 1324 aa18.43■□□□□ 0.54
SCN1B-204ENST00000596348 RAB11FIP3O75154 756 aa18.42■□□□□ 0.54
SCN1B-204ENST00000596348 MCAMP43121 646 aa18.42■□□□□ 0.54
SCN1B-204ENST00000596348 AACSQ86V21 672 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms