RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 SASH3O75995 380 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 SRLQ86TD4 932 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 PARD6BQ9BYG5 372 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
TRPM4-205ENST00000595519 IQCB1Q15051 598 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 HINFPQ9BQA5 517 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 MRC1P22897 1456 aa17.09■□□□□ 0.33
TRPM4-205ENST00000595519 AOX1Q06278 1338 aa17.08■□□□□ 0.33
TRPM4-205ENST00000595519 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.33
TRPM4-205ENST00000595519 GOLGA5Q8TBA6 731 aa17.08■□□□□ 0.33
TRPM4-205ENST00000595519 GLI3P10071 1580 aa17.08■□□□□ 0.33
TRPM4-205ENST00000595519 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
TRPM4-205ENST00000595519 ACTN2P35609 894 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 SLC20A2Q08357 652 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 MYCBPQ99417 103 aaPredicted RBP17.08■□□□□ 0.32
TRPM4-205ENST00000595519 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.32
TRPM4-205ENST00000595519 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 FBXO18Q8NFZ0 1043 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.32
TRPM4-205ENST00000595519 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 TPM1P09493 284 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 ARMCX5Q6P1M9 558 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 EDC3Q96F86 508 aaKnown RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 NCOA5Q9HCD5 579 aaKnown RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 LRRFIP1Q32MZ4 808 aaKnown RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 CTAGE5O15320 804 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 CAVIN2O95810 425 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-205ENST00000595519 LONRF2Q1L5Z9 754 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 SUGCTQ9HAC7 445 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 TAF6LQ9Y6J9 622 aa17.07■□□□□ 0.32
TRPM4-205ENST00000595519 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 Q6ZUG5 572 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
TRPM4-205ENST00000595519 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
TRPM4-205ENST00000595519 LIG3P49916 1009 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 CENPHQ9H3R5 247 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 CCP110O43303 1012 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
TRPM4-205ENST00000595519 CTR9Q6PD62 1173 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
TRPM4-205ENST00000595519 SEC62Q99442 399 aaKnown RBP17.06■□□□□ 0.32
TRPM4-205ENST00000595519 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 MEGF6O75095 1541 aa17.06■□□□□ 0.32
TRPM4-205ENST00000595519 MTX1Q13505 466 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 SLC27A2O14975 620 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 N4BP1O75113 896 aaKnown RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 IVLP07476 585 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 FANCCQ00597 558 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 TEX2Q8IWB9 1127 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 FAM212AQ96EL1 285 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 ADKP55263 362 aaKnown RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 ST3GAL1Q11201 340 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 DNAJC21Q5F1R6 531 aaKnown RBP17.05■□□□□ 0.32
TRPM4-205ENST00000595519 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
TRPM4-205ENST00000595519 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
TRPM4-205ENST00000595519 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
TRPM4-205ENST00000595519 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
TRPM4-205ENST00000595519 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
TRPM4-205ENST00000595519 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
TRPM4-205ENST00000595519 DHX40Q8IX18 779 aaKnown RBP17.04■□□□□ 0.32
TRPM4-205ENST00000595519 ELP1O95163 1332 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
TRPM4-205ENST00000595519 PDIA6Q15084 440 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
TRPM4-205ENST00000595519 ERLIN1O75477 346 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 CDC25BP30305 580 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 HSP90AB3PQ58FF7 597 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
TRPM4-205ENST00000595519 WDR24Q96S15 920 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms