RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 CRHR2Q13324 411 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 GCKRQ14397 625 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 AOX1Q06278 1338 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 SSC5DA1L4H1 1573 aa12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 MYH3P11055 1940 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 COL1A1P02452 1464 aaPredicted RBP12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 ZNF333Q96JL9 665 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 DEFB129Q9H1M3 183 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 PCDHAC2Q9Y5I4 1007 aa12.49□□□□□ -0.41
NOTCH3-202ENST00000595045 ZNF804BA4D1E1 1349 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 ITGA6P23229 1130 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 GJA5P36382 358 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 SP3Q02447 781 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 TTLL5Q6EMB2 1281 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
NOTCH3-202ENST00000595045 ECM29Q5VYK3 1845 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 H0YGN5 161 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 FOXO4P98177 505 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 TWISTNBQ3B726 338 aaPredicted RBP12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 C15orf52Q6ZUT6 534 aaKnown RBP12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 PTPN18Q99952 460 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 CD209Q9NNX6 404 aa12.47□□□□□ -0.41
NOTCH3-202ENST00000595045 UNCXA6NJT0 531 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 VAMP4O75379 141 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 GTF2IP78347 998 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 CHRNDQ07001 517 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 FLIIQ13045 1269 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
NOTCH3-202ENST00000595045 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 DLGAP5Q15398 846 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 PPP2R3BQ9Y5P8 575 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 PTCH2Q9Y6C5 1203 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
NOTCH3-202ENST00000595045 IL16Q14005 1332 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 TAF5LO75529 589 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 IL1R1P14778 569 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 SUPT20HL1Q3ZLR7 823 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 NBPF12Q5TAG4 269 aaPredicted RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 LINS1Q8NG48 757 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 ANKRD2Q9GZV1 360 aa12.44□□□□□ -0.42
NOTCH3-202ENST00000595045 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
NOTCH3-202ENST00000595045 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
NOTCH3-202ENST00000595045 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
NOTCH3-202ENST00000595045 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
NOTCH3-202ENST00000595045 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
NOTCH3-202ENST00000595045 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 F6X3S4 739 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 ANKRD13AQ8IZ07 590 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
NOTCH3-202ENST00000595045 ZSWIM8A7E2V4 1837 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 DLL1O00548 723 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 CFAP100Q494V2 611 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 SH3TC2Q8TF17 1288 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 BRI3BPQ8WY22 251 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 MPHOSPH8Q99549 860 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
NOTCH3-202ENST00000595045 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 ANKRD18BA2A2Z9 1011 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 MYO1BO43795 1136 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 RASA3Q14644 834 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms