RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 SULT6B1Q6IMI4 303 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 KCNV1Q6PIU1 500 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 CHD1LQ86WJ1 897 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 ACBD3Q9H3P7 528 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 AVENQ9NQS1 362 aaPredicted RBP5.1□□□□□ -1.59
LRIT3-202ENST00000594814 IMPACTQ9P2X3 320 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 PCDHB15Q9Y5E8 787 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 CRYBG1Q9Y4K1 1723 aa5.1□□□□□ -1.59
LRIT3-202ENST00000594814 SYCE3A1L190 88 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 SPDYE4A6NLX3 237 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 TIMM44O43615 452 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 DIAPH1O60610 1272 aaKnown RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 VAMP4O75379 141 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CCDC192P0DO97 292 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 SOS2Q07890 1332 aaPredicted RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 TSR1Q2NL82 804 aaKnown RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CCDC158Q5M9N0 1113 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 SPATA31A3Q5VYP0 1347 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 ARHGEF25Q86VW2 580 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 ANKRD20A12PQ8NF67 263 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 FAM200AQ8TCP9 573 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CEP63Q96MT8 703 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CXorf56Q9H5V9 222 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 KLF15Q9UIH9 416 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 AKAP2Q9Y2D5 859 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 RGPD3A6NKT7 1758 aaPredicted RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 RGPD4Q7Z3J3 1758 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 A0A087WUV0 522 aaPredicted RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 PSDA5PKW4 1024 aaPredicted RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CTAGE5O15320 804 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 MYO1BO43795 1136 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 ACTN2P35609 894 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 ZSCAN26Q16670 478 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 CEP135Q66GS9 1140 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 C16orf54Q6UWD8 224 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 FCHSD1Q86WN1 690 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 NT5DC4Q86YG4 428 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 FUCA2Q9BTY2 467 aa5.09□□□□□ -1.59
LRIT3-202ENST00000594814 TMX4Q9H1E5 349 aaPredicted RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 MAP3K20Q9NYL2 800 aaKnown RBP5.09□□□□□ -1.59
LRIT3-202ENST00000594814 MSH6P52701 1360 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 PHLPP2Q6ZVD8 1323 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 GOLGA6L9A6NEM1 432 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 BCAR3O75815 825 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 ZRANB2O95218 330 aaKnown RBP eCLIP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 TNNT1P13805 278 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 HOXA10P31260 410 aaPredicted RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 CORO7P57737 925 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 LARP1BQ659C4 914 aaKnown RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 TMCO3Q6UWJ1 677 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 ANKRD18AQ8IVF6 992 aa5.09□□□□□ -1.6
LRIT3-202ENST00000594814 APLFQ8IW19 511 aaPredicted RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 PAIP2Q9BPZ3 127 aaKnown RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 TEX13AQ9BXU3 409 aaPredicted RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 THRAP3Q9Y2W1 955 aaKnown RBP5.09□□□□□ -1.6
LRIT3-202ENST00000594814 RGS12O14924 1447 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 LTN1O94822 1766 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 ANKRD18BA2A2Z9 1011 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 PRPF40AO75400 957 aaKnown RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 SASH1O94885 1247 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TMPOP42166 694 aaKnown RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 DDR1Q08345 913 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 IFT88Q13099 833 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 MTHFSDQ2M296 383 aaKnown RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 MCM10Q7L590 875 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TAX1BP1Q86VP1 789 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 MRFAP1L1Q96HT8 127 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 COG6Q9Y2V7 657 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 RRP15Q9Y3B9 282 aaKnown RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 COL18A1P39060 1754 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 POU3F3P20264 500 aaPredicted RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 MAP2K2P36507 400 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TTLL5Q6EMB2 1281 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 ZNF746Q6NUN9 644 aaPredicted RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 PODNQ7Z5L7 613 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 CCDC50Q8IVM0 306 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TSPYL6Q8N831 410 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 HNRNPLLQ8WVV9 542 aaKnown RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 FBXO9Q9UK97 447 aaPredicted RBP5.08□□□□□ -1.6
LRIT3-202ENST00000594814 KIAA0232Q92628 1395 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 MAP3K5Q99683 1374 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TTC41PQ6P2S7 1318 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TTC21AQ8NDW8 1320 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 PEX14O75381 377 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 KMT5BQ4FZB7 885 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 GORABQ5T7V8 394 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 LRCH2Q5VUJ6 765 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 TCP11Q8WWU5 503 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 SGIP1Q9BQI5 828 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 ZBTB40Q9NUA8 1239 aa5.08□□□□□ -1.6
LRIT3-202ENST00000594814 SLIT3O75094 1523 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 CAMTA1Q9Y6Y1 1673 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 RPAP1Q9BWH6 1393 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 EFCAB8A8MWE9 144 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 SEMA3EO15041 775 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 SLMAPQ14BN4 828 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 BRD3Q15059 726 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 RBM26Q5T8P6 1007 aaKnown RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 DBX2Q6ZNG2 339 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms