RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 SAGE1Q9NXZ1 904 aa16.1■□□□□ 0.17
CLPP-202ENST00000594780 IRS2Q9Y4H2 1338 aa16.1■□□□□ 0.17
CLPP-202ENST00000594780 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
CLPP-202ENST00000594780 SZT2Q5T011 3432 aa16.09■□□□□ 0.17
CLPP-202ENST00000594780 RAD17O75943 681 aa16.09■□□□□ 0.17
CLPP-202ENST00000594780 KLRK1P26718 216 aa16.09■□□□□ 0.17
CLPP-202ENST00000594780 MTX1Q13505 466 aa16.09■□□□□ 0.17
CLPP-202ENST00000594780 RPAP2Q8IXW5 612 aaPredicted RBP16.09■□□□□ 0.17
CLPP-202ENST00000594780 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
CLPP-202ENST00000594780 SHTN1A0MZ66 631 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 EYA2O00167 538 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
CLPP-202ENST00000594780 HUNKP57058 714 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 RNF186Q9NXI6 227 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 HPS5Q9UPZ3 1129 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.16
CLPP-202ENST00000594780 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 BRCA2P51587 3418 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 KCNJ4P48050 445 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 TNIP1Q15025 636 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
CLPP-202ENST00000594780 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 CTU1Q7Z7A3 348 aaKnown RBP16.07■□□□□ 0.16
CLPP-202ENST00000594780 SMC5Q8IY18 1101 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 COPRSQ9NQ92 184 aa16.07■□□□□ 0.16
CLPP-202ENST00000594780 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
CLPP-202ENST00000594780 G3V3G9 751 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 PSMD14O00487 310 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 TRPA1O75762 1119 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
CLPP-202ENST00000594780 DCAF8Q5TAQ9 597 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 CEP85Q6P2H3 762 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 CENPFP49454 3210 aa16.06■□□□□ 0.16
CLPP-202ENST00000594780 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 CIAO1O76071 339 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 PDE8BO95263 885 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 KIF23Q02241 960 aaPredicted RBP16.05■□□□□ 0.16
CLPP-202ENST00000594780 UBE4AQ14139 1066 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 METTL24Q5JXM2 366 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 COA1Q9GZY4 146 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 SIL1Q9H173 461 aa16.05■□□□□ 0.16
CLPP-202ENST00000594780 VIL1P09327 827 aaKnown RBP16.04■□□□□ 0.16
CLPP-202ENST00000594780 RGMBQ6NW40 437 aa16.04■□□□□ 0.16
CLPP-202ENST00000594780 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
CLPP-202ENST00000594780 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
CLPP-202ENST00000594780 POLA2Q14181 598 aa16.03■□□□□ 0.16
CLPP-202ENST00000594780 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
CLPP-202ENST00000594780 USP48Q86UV5 1035 aa16.03■□□□□ 0.16
CLPP-202ENST00000594780 ZC3H15Q8WU90 426 aaKnown RBP16.03■□□□□ 0.16
CLPP-202ENST00000594780 CD209Q9NNX6 404 aa16.03■□□□□ 0.16
CLPP-202ENST00000594780 CEP290O15078 2479 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 USP17L3A6NCW0 530 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 USP17L4A6NCW7 530 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 FGFR2P21802 821 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
CLPP-202ENST00000594780 USP17L1Q7RTZ2 530 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 SSH3Q8TE77 659 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 DPF2Q92785 391 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
CLPP-202ENST00000594780 PSME4Q14997 1843 aa16.02■□□□□ 0.16
CLPP-202ENST00000594780 PAPPA2Q9BXP8 1791 aa16.02■□□□□ 0.15
CLPP-202ENST00000594780 IL1R1P14778 569 aa16.01■□□□□ 0.15
CLPP-202ENST00000594780 GYG1P46976 350 aa16.01■□□□□ 0.15
CLPP-202ENST00000594780 CSRNP1Q96S65 589 aa16.01■□□□□ 0.15
CLPP-202ENST00000594780 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
CLPP-202ENST00000594780 CNOT7Q9UIV1 285 aaKnown RBP16.01■□□□□ 0.15
CLPP-202ENST00000594780 TRIOBPQ9H2D6 2365 aa16.01■□□□□ 0.15
CLPP-202ENST00000594780 HMMRO75330 724 aa16■□□□□ 0.15
CLPP-202ENST00000594780 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
CLPP-202ENST00000594780 PUM3Q15397 648 aaKnown RBP16■□□□□ 0.15
CLPP-202ENST00000594780 DACT2Q5SW24 774 aa16■□□□□ 0.15
CLPP-202ENST00000594780 STRIP1Q5VSL9 837 aa16■□□□□ 0.15
CLPP-202ENST00000594780 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
CLPP-202ENST00000594780 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
CLPP-202ENST00000594780 FBXO33Q7Z6M2 555 aa16■□□□□ 0.15
CLPP-202ENST00000594780 GMLQ99445 158 aa16■□□□□ 0.15
CLPP-202ENST00000594780 MXD3Q9BW11 206 aa16■□□□□ 0.15
CLPP-202ENST00000594780 GBA2Q9HCG7 927 aaPredicted RBP16■□□□□ 0.15
CLPP-202ENST00000594780 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
CLPP-202ENST00000594780 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
CLPP-202ENST00000594780 ZNF646O15015 1829 aaPredicted RBP15.99■□□□□ 0.15
CLPP-202ENST00000594780 ADM5C9JUS6 153 aa15.99■□□□□ 0.15
CLPP-202ENST00000594780 EGFRP00533 1210 aa15.99■□□□□ 0.15
CLPP-202ENST00000594780 SLC10A3P09131 477 aa15.99■□□□□ 0.15
CLPP-202ENST00000594780 HIBADHP31937 336 aaKnown RBP15.99■□□□□ 0.15
CLPP-202ENST00000594780 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
CLPP-202ENST00000594780 TTLL5Q6EMB2 1281 aa15.99■□□□□ 0.15
CLPP-202ENST00000594780 TDRD7Q8NHU6 1098 aaKnown RBP15.99■□□□□ 0.15
CLPP-202ENST00000594780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
CLPP-202ENST00000594780 ZNF609O15014 1411 aa15.98■□□□□ 0.15
CLPP-202ENST00000594780 ZNF157P51786 506 aaPredicted RBP15.98■□□□□ 0.15
CLPP-202ENST00000594780 GTF2IP78347 998 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms