RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
SMG9-202ENST00000594081 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
SMG9-202ENST00000594081 MYO1BO43795 1136 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
SMG9-202ENST00000594081 IREB2P48200 963 aaKnown RBP10.95□□□□□ -0.66
SMG9-202ENST00000594081 SLC4A8Q2Y0W8 1093 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 CERS5Q8N5B7 392 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 MTMR14Q8NCE2 650 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
SMG9-202ENST00000594081 AOX1Q06278 1338 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 DDX58O95786 925 aaKnown RBP10.94□□□□□ -0.66
SMG9-202ENST00000594081 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
SMG9-202ENST00000594081 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 CFAP100Q494V2 611 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
SMG9-202ENST00000594081 NBPF11Q86T75 865 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 OPTNQ96CV9 577 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 MAP3K2Q9Y2U5 619 aa10.94□□□□□ -0.66
SMG9-202ENST00000594081 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
SMG9-202ENST00000594081 F8W031 263 aaPredicted RBP10.93□□□□□ -0.66
SMG9-202ENST00000594081 ELL2O00472 640 aaPredicted RBP10.93□□□□□ -0.66
SMG9-202ENST00000594081 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
SMG9-202ENST00000594081 IGKV5-2P06315 115 aa10.93□□□□□ -0.66
SMG9-202ENST00000594081 KCNJ4P48050 445 aa10.93□□□□□ -0.66
SMG9-202ENST00000594081 TAF1CQ15572 869 aaPredicted RBP10.93□□□□□ -0.66
SMG9-202ENST00000594081 ANKRD2Q9GZV1 360 aa10.93□□□□□ -0.66
SMG9-202ENST00000594081 CD209Q9NNX6 404 aa10.93□□□□□ -0.66
SMG9-202ENST00000594081 ZNF853P0CG23 659 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 ITGA6P23229 1130 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 RASA3Q14644 834 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 CWF19L2Q2TBE0 894 aaKnown RBP10.92□□□□□ -0.66
SMG9-202ENST00000594081 UBE3BQ7Z3V4 1068 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 SH3TC2Q8TF17 1288 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 BRI3BPQ8WY22 251 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 PRMT6Q96LA8 375 aaPredicted RBP10.92□□□□□ -0.66
SMG9-202ENST00000594081 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
SMG9-202ENST00000594081 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
SMG9-202ENST00000594081 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
SMG9-202ENST00000594081 CCL15-CCL14A0A0B4J2E2 113 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 PI4KAP2A4QPH2 592 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 CHRNDQ07001 517 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 NEXNQ0ZGT2 675 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMG9-202ENST00000594081 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 CCL15Q16663 113 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 KSR2Q6VAB6 950 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 PI4KAP1Q8N8J0 262 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 SHISA4Q96DD7 197 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 MPHOSPH8Q99549 860 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 ARHGAP39Q9C0H5 1083 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 IFT57Q9NWB7 429 aa10.91□□□□□ -0.66
SMG9-202ENST00000594081 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 SNAP23O00161 211 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 DLL1O00548 723 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 GTF2A2P52657 109 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 RBM5P52756 815 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMG9-202ENST00000594081 TNFAIP1Q13829 316 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 VGLL4Q14135 290 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 CCDC30Q5VVM6 783 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 ZNF804AQ7Z570 1209 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 JAG2Q9Y219 1238 aa10.9□□□□□ -0.66
SMG9-202ENST00000594081 MYBBP1AQ9BQG0 1328 aaKnown RBP10.89□□□□□ -0.67
SMG9-202ENST00000594081 H7C1W4 665 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 IL1R1P14778 569 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 FKBP1AP62942 108 aaKnown RBP10.89□□□□□ -0.67
SMG9-202ENST00000594081 GNAI1P63096 354 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 LACTBP83111 547 aaPredicted RBP10.89□□□□□ -0.67
SMG9-202ENST00000594081 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.89□□□□□ -0.67
SMG9-202ENST00000594081 C15orf52Q6ZUT6 534 aaKnown RBP10.89□□□□□ -0.67
SMG9-202ENST00000594081 C8orf58Q8NAV2 365 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 PLA2G12BQ9BX93 195 aa10.89□□□□□ -0.67
SMG9-202ENST00000594081 TLR2O60603 784 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 TAF5LO75529 589 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 KIF22Q14807 665 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.671e-8■■■□□ 16.1
SMG9-202ENST00000594081 DPF3Q92784 378 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 TEPSINQ96N21 525 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 ZNF70Q9UC06 446 aaPredicted RBP10.88□□□□□ -0.67
SMG9-202ENST00000594081 CSADQ9Y600 493 aa10.88□□□□□ -0.67
SMG9-202ENST00000594081 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
SMG9-202ENST00000594081 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
SMG9-202ENST00000594081 GNRH1P01148 92 aa10.87□□□□□ -0.67
SMG9-202ENST00000594081 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
SMG9-202ENST00000594081 MTFR1Q15390 333 aa10.87□□□□□ -0.67
SMG9-202ENST00000594081 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
SMG9-202ENST00000594081 HELBQ8NG08 1087 aaPredicted RBP10.87□□□□□ -0.67
SMG9-202ENST00000594081 PRO3102Q9H379 93 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms