RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MS4A4AQ96JQ5 239 aa4.3□□□□□ -1.72
VRK3-204ENST00000593912 NBPF3Q9H094 633 aa4.3□□□□□ -1.72
VRK3-204ENST00000593912 PAK6Q9NQU5 681 aaPredicted RBP4.3□□□□□ -1.72
VRK3-204ENST00000593912 ZNF652Q9Y2D9 606 aa4.3□□□□□ -1.72
VRK3-204ENST00000593912 TRIOO75962 3097 aa4.3□□□□□ -1.72
VRK3-204ENST00000593912 ANKRD11Q6UB99 2663 aaPredicted RBP4.3□□□□□ -1.72
VRK3-204ENST00000593912 ZFHX2Q9C0A1 2572 aaPredicted RBP4.3□□□□□ -1.72
VRK3-204ENST00000593912 MAST2Q6P0Q8 1798 aa4.3□□□□□ -1.72
VRK3-204ENST00000593912 DMXL1Q9Y485 3027 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 TRANK1O15050 2925 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 COL4A1P02462 1669 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 ZNF318Q5VUA4 2279 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 ADGRA2Q96PE1 1338 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CCL15-CCL14A0A0B4J2E2 113 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 MED19A0JLT2 244 aaPredicted RBP4.29□□□□□ -1.72
VRK3-204ENST00000593912 PRR33A8MZF0 331 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 TLR2O60603 784 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 SASH1O94885 1247 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 GNRH1P01148 92 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 ITGB8P26012 769 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CCL15Q16663 113 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 LRRC26Q2I0M4 334 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 WASHC4Q2M389 1173 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 SP8Q8IXZ3 490 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CNTNAP3BQ96NU0 1288 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CNTNAP3Q9BZ76 1288 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 C11orf49Q9H6J7 331 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 ELP3Q9H9T3 547 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CD320Q9NPF0 282 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 CPA4Q9UI42 421 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 DMDP11532 3685 aa4.29□□□□□ -1.72
VRK3-204ENST00000593912 ROCK2O75116 1388 aaKnown RBP4.28□□□□□ -1.72
VRK3-204ENST00000593912 DNAH14Q0VDD8 3507 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 UBN2Q6ZU65 1347 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 PI4K2BG5E9Z4 385 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 WNT10BO00744 389 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 ADCY3O60266 1144 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 GFRA3O60609 400 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 GPTP24298 496 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 ADGRE1Q14246 886 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 RSBN1LQ6PCB5 846 aaPredicted RBP4.28□□□□□ -1.72
VRK3-204ENST00000593912 TTC5Q8N0Z6 440 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 SLAIN1Q8ND83 568 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 OPTNQ96CV9 577 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
VRK3-204ENST00000593912 MXD3Q9BW11 206 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 NYXQ9GZU5 481 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.72
VRK3-204ENST00000593912 PRDM12Q9H4Q4 367 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 POLLQ9UGP5 575 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 DACH1Q9UI36 760 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 VPS13AQ96RL7 3174 aa4.28□□□□□ -1.72
VRK3-204ENST00000593912 WDR87Q6ZQQ6 2873 aa4.28□□□□□ -1.73
VRK3-204ENST00000593912 ANKRD36CQ5JPF3 1778 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 PLXNA1Q9UIW2 1896 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 BTBD19C9JJ37 291 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 C6orf229H3BNL8 230 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 USP17L8P0C7I0 530 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 HOXB3P14651 431 aaPredicted RBP4.27□□□□□ -1.73
VRK3-204ENST00000593912 IGFBP4P22692 258 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 DNAJB2P25686 324 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 HOXD10P28358 340 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 AKNAD1Q5T1N1 836 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 SUSD4Q5VX71 490 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 C17orf99Q6UX52 265 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 ERMP1Q7Z2K6 904 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 MICALL1Q8N3F8 863 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 GMLQ99445 158 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 GAS2L1Q99501 681 aaPredicted RBP4.27□□□□□ -1.73
VRK3-204ENST00000593912 ZNF576Q9H609 170 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 FAM86C1Q9NVL1 165 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 CXXC1Q9P0U4 656 aaPredicted RBP4.27□□□□□ -1.73
VRK3-204ENST00000593912 POLKQ9UBT6 870 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 TAOK2Q9UL54 1235 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 USP16Q9Y5T5 823 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 DOCK3Q8IZD9 2030 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 TPRP12270 2363 aaKnown RBP4.27□□□□□ -1.73
VRK3-204ENST00000593912 ZNF292O60281 2723 aa4.27□□□□□ -1.73
VRK3-204ENST00000593912 SIPA1L3O60292 1781 aaPredicted RBP4.27□□□□□ -1.73
VRK3-204ENST00000593912 FASNP49327 2511 aaKnown RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 NCOR2Q9Y618 2525 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 KCNQ3O43525 872 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 USP2O75604 605 aaPredicted RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 NTSR2O95665 410 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 FLT3LGP49771 235 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 GPSM2P81274 684 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 TRIM32Q13049 653 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 ACAP1Q15027 740 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 NBPF10Q6P3W6 841 aaKnown RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 ANKLE1Q8NAG6 615 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 AGBL3Q8NEM8 1001 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 TEX13AQ9BXU3 409 aaPredicted RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 RNF216Q9NWF9 866 aaPredicted RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
VRK3-204ENST00000593912 AK9Q5TCS8 1911 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 PLXNA3P51805 1871 aa4.26□□□□□ -1.73
VRK3-204ENST00000593912 PTPRZ1P23471 2315 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms