RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ADORA1P30542 326 aa18.98■□□□□ 0.63
TRIM47-206ENST00000592942 FKBP1AP62942 108 aaKnown RBP18.98■□□□□ 0.63
TRIM47-206ENST00000592942 TBC1D10BQ4KMP7 808 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-206ENST00000592942 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
TRIM47-206ENST00000592942 MAP1SQ66K74 1059 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-206ENST00000592942 FBXW7Q969H0 707 aa18.98■□□□□ 0.63
TRIM47-206ENST00000592942 IQSEC3Q9UPP2 1182 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-206ENST00000592942 CLEC11AQ9Y240 323 aa18.98■□□□□ 0.63
TRIM47-206ENST00000592942 RBM26Q5T8P6 1007 aaKnown RBP18.97■□□□□ 0.63
TRIM47-206ENST00000592942 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
TRIM47-206ENST00000592942 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
TRIM47-206ENST00000592942 MYO3BQ8WXR4 1341 aa18.97■□□□□ 0.63
TRIM47-206ENST00000592942 A0A1B0GUL7 405 aa18.96■□□□□ 0.63
TRIM47-206ENST00000592942 ZC3H15Q8WU90 426 aaKnown RBP18.96■□□□□ 0.63
TRIM47-206ENST00000592942 PASKQ96RG2 1323 aa18.96■□□□□ 0.63
TRIM47-206ENST00000592942 ZBTB22O15209 634 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 PHKA1P46020 1223 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 GRIK5Q16478 980 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 VPS37DQ86XT2 251 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 KIAA0825Q8IV33 1275 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 XAGE2Q96GT9 111 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 MYOZ2Q9NPC6 264 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 AKAP2Q9Y2D5 859 aa18.95■□□□□ 0.62
TRIM47-206ENST00000592942 ASTN2O75129 1339 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-206ENST00000592942 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRIM47-206ENST00000592942 KIF4BQ2VIQ3 1234 aa18.94■□□□□ 0.62
TRIM47-206ENST00000592942 ZBED3Q96IU2 234 aaPredicted RBP18.94■□□□□ 0.62
TRIM47-206ENST00000592942 GPR108Q9NPR9 543 aa18.94■□□□□ 0.62
TRIM47-206ENST00000592942 MMP14P50281 582 aa18.93■□□□□ 0.62
TRIM47-206ENST00000592942 MFSD14BQ5SR56 506 aa18.93■□□□□ 0.62
TRIM47-206ENST00000592942 CCDC102BQ68D86 513 aa18.93■□□□□ 0.62
TRIM47-206ENST00000592942 CRBNQ96SW2 442 aa18.93■□□□□ 0.62
TRIM47-206ENST00000592942 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
TRIM47-206ENST00000592942 SCARF1Q14162 830 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 NBPF9Q3BBW0 867 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 TNNI3KQ59H18 835 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 NEUROD6Q96NK8 337 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 PCDHAC2Q9Y5I4 1007 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 FPGT-TNNI3KV9GXZ4 949 aa18.92■□□□□ 0.62
TRIM47-206ENST00000592942 POLR2AP24928 1970 aaKnown RBP18.92■□□□□ 0.62
TRIM47-206ENST00000592942 COL1A1P02452 1464 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-206ENST00000592942 F8W031 263 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-206ENST00000592942 WNT10BO00744 389 aa18.91■□□□□ 0.62
TRIM47-206ENST00000592942 CHAF1AQ13111 956 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-206ENST00000592942 DLK2Q6UY11 383 aa18.91■□□□□ 0.62
TRIM47-206ENST00000592942 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
TRIM47-206ENST00000592942 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
TRIM47-206ENST00000592942 PCNTO95613 3336 aa18.91■□□□□ 0.62
TRIM47-206ENST00000592942 TRAF5O00463 557 aa18.9■□□□□ 0.62
TRIM47-206ENST00000592942 HTRA3P83110 453 aa18.9■□□□□ 0.62
TRIM47-206ENST00000592942 OS9Q13438 667 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-206ENST00000592942 MTMR14Q8NCE2 650 aa18.9■□□□□ 0.62
TRIM47-206ENST00000592942 EAF2Q96CJ1 260 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-206ENST00000592942 GLIS2Q9BZE0 524 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-206ENST00000592942 HMMRO75330 724 aa18.89■□□□□ 0.61
TRIM47-206ENST00000592942 FRAT2O75474 233 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-206ENST00000592942 HDAC9Q9UKV0 1011 aa18.89■□□□□ 0.61
TRIM47-206ENST00000592942 ARAP2Q8WZ64 1704 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 SEMA3EO15041 775 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 RASGRF1Q13972 1273 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 CST9Q5W186 159 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 CDC37L1Q7L3B6 337 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 USP48Q86UV5 1035 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 JMYQ8N9B5 988 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 WDR66Q8TBY9 1149 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 TBC1D22AQ8WUA7 517 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 KLRG1Q96E93 195 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 PRMT6Q96LA8 375 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-206ENST00000592942 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 GNL3LQ9NVN8 582 aaKnown RBP18.88■□□□□ 0.61
TRIM47-206ENST00000592942 DENND2AQ9ULE3 1009 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
TRIM47-206ENST00000592942 AOX1Q06278 1338 aa18.88■□□□□ 0.61
TRIM47-206ENST00000592942 CFAP100Q494V2 611 aa18.87■□□□□ 0.61
TRIM47-206ENST00000592942 HSP90AB4PQ58FF6 505 aa18.87■□□□□ 0.61
TRIM47-206ENST00000592942 COL13A1Q5TAT6 717 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-206ENST00000592942 ANGEL2Q5VTE6 544 aaKnown RBP18.87■□□□□ 0.61
TRIM47-206ENST00000592942 CCDC8Q9H0W5 538 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-206ENST00000592942 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
TRIM47-206ENST00000592942 GGA3Q9NZ52 723 aa18.87■□□□□ 0.61
TRIM47-206ENST00000592942 DBNLQ9UJU6 430 aaKnown RBP18.87■□□□□ 0.61
TRIM47-206ENST00000592942 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-206ENST00000592942 ERC1Q8IUD2 1116 aa18.86■□□□□ 0.61
TRIM47-206ENST00000592942 DCPSQ96C86 337 aaKnown RBP18.86■□□□□ 0.61
TRIM47-206ENST00000592942 MRIQ9BWK5 157 aa18.86■□□□□ 0.61
TRIM47-206ENST00000592942 HMG20BQ9P0W2 317 aa18.86■□□□□ 0.61
TRIM47-206ENST00000592942 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
TRIM47-206ENST00000592942 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
TRIM47-206ENST00000592942 SALL1Q9NSC2 1324 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 SPDYE2BA6NHP3 402 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 ADM5C9JUS6 153 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 SPDYE6P0CI01 402 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 KRT26Q7Z3Y9 468 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 DCTPP1Q9H773 170 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
TRIM47-206ENST00000592942 SERPINA10Q9UK55 444 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms