RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 AKAP2Q9Y2D5 859 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 MB21D2Q8IYB1 491 aaPredicted RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 TSC1Q92574 1164 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 POLR3EQ9NVU0 708 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 YEATS4O95619 227 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
ZNF540-210ENST00000592533 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
ZNF540-210ENST00000592533 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
ZNF540-210ENST00000592533 ZNF594Q96JF6 807 aaPredicted RBP13.56□□□□□ -0.24
ZNF540-210ENST00000592533 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 NEDD4P46934 1319 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 DOCK2Q92608 1830 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
ZNF540-210ENST00000592533 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
ZNF540-210ENST00000592533 DHX16O60231 1041 aaKnown RBP13.55□□□□□ -0.24
ZNF540-210ENST00000592533 A1BGP04217 495 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
ZNF540-210ENST00000592533 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
ZNF540-210ENST00000592533 HPS5Q9UPZ3 1129 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 ITGB4P16144 1822 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 LRP5O75197 1615 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 CSF1RP07333 972 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 APPBP2Q92624 585 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 NAT10Q9H0A0 1025 aaKnown RBP13.55□□□□□ -0.24
ZNF540-210ENST00000592533 ME1P48163 572 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 TTLL5Q6EMB2 1281 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
ZNF540-210ENST00000592533 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
ZNF540-210ENST00000592533 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
ZNF540-210ENST00000592533 ZNF512BQ96KM6 892 aaPredicted RBP13.54□□□□□ -0.24
ZNF540-210ENST00000592533 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
ZNF540-210ENST00000592533 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
ZNF540-210ENST00000592533 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
ZNF540-210ENST00000592533 FGAP02671 866 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
ZNF540-210ENST00000592533 ANTXR2P58335 489 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 TTC39AQ5SRH9 613 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 NYAP1Q6ZVC0 841 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
ZNF540-210ENST00000592533 LRP6O75581 1613 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 PRC1O43663 620 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 TNNT1P13805 278 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
ZNF540-210ENST00000592533 IMPACTQ9P2X3 320 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 CDHR2Q9BYE9 1310 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 BECN2A8MW95 431 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 ADORA1P30542 326 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 CCZ1BP86790 482 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
ZNF540-210ENST00000592533 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
ZNF540-210ENST00000592533 NUP98P52948 1817 aa13.52□□□□□ -0.24
ZNF540-210ENST00000592533 GSDMDP57764 484 aa13.52□□□□□ -0.24
ZNF540-210ENST00000592533 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.24
ZNF540-210ENST00000592533 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.24
ZNF540-210ENST00000592533 NDUFA8P51970 172 aa13.52□□□□□ -0.25
ZNF540-210ENST00000592533 FOSBP53539 338 aa13.52□□□□□ -0.25
ZNF540-210ENST00000592533 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZNF540-210ENST00000592533 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
ZNF540-210ENST00000592533 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
ZNF540-210ENST00000592533 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
ZNF540-210ENST00000592533 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
ZNF540-210ENST00000592533 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 GOLGA8BA8MQT2 603 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 SPTLC2O15270 562 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 KCNJ6P48051 423 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 SCARF1Q14162 830 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 CLIC4Q9Y696 253 aa13.51□□□□□ -0.25
ZNF540-210ENST00000592533 IL2RBP14784 551 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 AXDND1Q5T1B0 1012 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 AOPEPQ8N6M6 819 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 PUS7LQ9H0K6 701 aaKnown RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
ZNF540-210ENST00000592533 ZMYM6O95789 1325 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 CCDC69A6NI79 296 aa13.5□□□□□ -0.25
ZNF540-210ENST00000592533 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms