RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 ZNF646O15015 1829 aaPredicted RBP9.66□□□□□ -0.86
VAT1-209ENST00000592388 TMEM265A0A087WTH1 108 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 SGPL1O95470 568 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 GNRH1P01148 92 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 SYN1P17600 705 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 IREB2P48200 963 aaKnown RBP9.65□□□□□ -0.86
VAT1-209ENST00000592388 PRMT2P55345 433 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 PDIA6Q15084 440 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 SF3B3Q15393 1217 aaKnown RBP9.65□□□□□ -0.86
VAT1-209ENST00000592388 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 PODNQ7Z5L7 613 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 SYMPKQ92797 1274 aaKnown RBP9.65□□□□□ -0.86
VAT1-209ENST00000592388 SRRDQ9UH36 339 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 SSC5DA1L4H1 1573 aa9.65□□□□□ -0.86
VAT1-209ENST00000592388 TLR2O60603 784 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 USP2O75604 605 aaPredicted RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 TFRCP02786 760 aaKnown RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 CTGFP29279 349 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 MAGEA10P43363 369 aaPredicted RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 UBXN2AP68543 259 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 DACT2Q5SW24 774 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 NBPF12Q5TAG4 269 aaPredicted RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 ANKRD13AQ8IZ07 590 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 CNKSR2Q8WXI2 1034 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 FAM89AQ96GI7 184 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 PAWRQ96IZ0 340 aaKnown RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 TRIM47Q96LD4 638 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 UNC93B1Q9H1C4 597 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 PNNQ9H307 717 aaKnown RBP9.64□□□□□ -0.87
VAT1-209ENST00000592388 PRUNE2Q8WUY3 3088 aa9.64□□□□□ -0.87
VAT1-209ENST00000592388 UNCXA6NJT0 531 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 WDHD1O75717 1129 aaPredicted RBP9.63□□□□□ -0.87
VAT1-209ENST00000592388 PSMC4P43686 418 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 SUPT20HL1Q3ZLR7 823 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 KIAA0825Q8IV33 1275 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 MAFAQ8NHW3 353 aaPredicted RBP9.63□□□□□ -0.87
VAT1-209ENST00000592388 SEC31BQ9NQW1 1179 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 LAS1LQ9Y4W2 734 aaKnown RBP9.63□□□□□ -0.87
VAT1-209ENST00000592388 LAMB1P07942 1786 aa9.63□□□□□ -0.87
VAT1-209ENST00000592388 MYPNQ86TC9 1320 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 PSME4Q14997 1843 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
VAT1-209ENST00000592388 OSBPP22059 807 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 HOXD10P28358 340 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 GTF2A2P52657 109 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 COPS6Q7L5N1 327 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
VAT1-209ENST00000592388 ZBED3Q96IU2 234 aaPredicted RBP9.62□□□□□ -0.87
VAT1-209ENST00000592388 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 CLRN2A0PK11 232 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 LMOD3Q0VAK6 560 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 MAP3K12Q12852 859 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
VAT1-209ENST00000592388 FAM109BQ6ICB4 259 aaPredicted RBP9.61□□□□□ -0.87
VAT1-209ENST00000592388 DIS3LQ8TF46 1054 aaKnown RBP9.61□□□□□ -0.87
VAT1-209ENST00000592388 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 DEFB118Q96PH6 123 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 CHPF2Q9P2E5 772 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 CPA4Q9UI42 421 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 PCDHAC2Q9Y5I4 1007 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
VAT1-209ENST00000592388 ALPK3Q96L96 1907 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 COL1A1P02452 1464 aaPredicted RBP9.6□□□□□ -0.87
VAT1-209ENST00000592388 ATP2B4P23634 1241 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 STRIP1Q5VSL9 837 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 NECAB2Q7Z6G3 386 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 CDX2Q99626 313 aaPredicted RBP9.6□□□□□ -0.87
VAT1-209ENST00000592388 VEZTQ9HBM0 779 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 PPP2R3BQ9Y5P8 575 aa9.6□□□□□ -0.87
VAT1-209ENST00000592388 XDHP47989 1333 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 BTBD19C9JJ37 291 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 CHL1O00533 1208 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
VAT1-209ENST00000592388 PRKCZQ05513 592 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 ZNF697Q5TEC3 545 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 TTLL5Q6EMB2 1281 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 C17orf99Q6UX52 265 aa9.59□□□□□ -0.87
VAT1-209ENST00000592388 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.59□□□□□ -0.87
VAT1-209ENST00000592388 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
VAT1-209ENST00000592388 PRKRIP1Q9H875 184 aaPredicted RBP9.59□□□□□ -0.87
VAT1-209ENST00000592388 ZNF804BA4D1E1 1349 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 A0A1B0GUL6 1792 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 MMP14P50281 582 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 VGLL4Q14135 290 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 RASA3Q14644 834 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 HDGFL1Q5TGJ6 251 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
VAT1-209ENST00000592388 HELBQ8NG08 1087 aaPredicted RBP9.58□□□□□ -0.88
VAT1-209ENST00000592388 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms