RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SLC9C2Q5TAH2 1124 aa27.42■■□□□ 1.98
SPHK1-210ENST00000592299 ZNF589Q86UQ0 364 aaPredicted RBP27.42■■□□□ 1.98
SPHK1-210ENST00000592299 LTBP1Q14766 1721 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 LSG1Q9H089 658 aaKnown RBP27.41■■□□□ 1.98
SPHK1-210ENST00000592299 HELLSQ9NRZ9 838 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 LRP2BPQ9P2M1 347 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 ABCF2Q9UG63 623 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 COL1A1P02452 1464 aaPredicted RBP27.41■■□□□ 1.98
SPHK1-210ENST00000592299 MAP3K12Q12852 859 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 TTLL6Q8N841 843 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 KIF13BQ9NQT8 1826 aa27.41■■□□□ 1.98
SPHK1-210ENST00000592299 MED23Q9ULK4 1368 aa27.4■■□□□ 1.98
SPHK1-210ENST00000592299 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
SPHK1-210ENST00000592299 CHAF1AQ13111 956 aaPredicted RBP27.4■■□□□ 1.98
SPHK1-210ENST00000592299 CCDC129Q6ZRS4 1044 aa27.4■■□□□ 1.98
SPHK1-210ENST00000592299 DLEC1Q9Y238 1755 aa27.4■■□□□ 1.98
SPHK1-210ENST00000592299 RIMBP2O15034 1052 aa27.39■■□□□ 1.98
SPHK1-210ENST00000592299 MCCP23508 829 aa27.39■■□□□ 1.98
SPHK1-210ENST00000592299 ADD2P35612 726 aa27.39■■□□□ 1.98
SPHK1-210ENST00000592299 KLHL34Q8N239 644 aa27.39■■□□□ 1.98
SPHK1-210ENST00000592299 EPB41L2O43491 1005 aaKnown RBP27.39■■□□□ 1.97
SPHK1-210ENST00000592299 PTH1RQ03431 593 aa27.39■■□□□ 1.97
SPHK1-210ENST00000592299 WWC3Q9ULE0 1092 aa27.39■■□□□ 1.97
SPHK1-210ENST00000592299 CCDC171Q6TFL3 1326 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 KCNA3P22001 575 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 TGFB2P61812 414 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 TDRD7Q8NHU6 1098 aaKnown RBP27.38■■□□□ 1.97
SPHK1-210ENST00000592299 APPBP2Q92624 585 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 OSBP2Q969R2 916 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 SGIP1Q9BQI5 828 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 ZC3H12CQ9C0D7 883 aaKnown RBP27.38■■□□□ 1.97
SPHK1-210ENST00000592299 CD209Q9NNX6 404 aa27.38■■□□□ 1.97
SPHK1-210ENST00000592299 PDE6AP16499 860 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 JAG2Q9Y219 1238 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 DOCK2Q92608 1830 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 MAST3O60307 1309 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 PDS5AQ29RF7 1337 aaKnown RBP27.37■■□□□ 1.97
SPHK1-210ENST00000592299 C21orf2O43822 256 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 MAGEB6Q8N7X4 407 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 C7orf43Q8WVR3 580 aa27.37■■□□□ 1.97
SPHK1-210ENST00000592299 DUOX1Q9NRD9 1551 aa27.36■■□□□ 1.97
SPHK1-210ENST00000592299 ZNF532Q9HCE3 1301 aa27.36■■□□□ 1.97
SPHK1-210ENST00000592299 UBE3CQ15386 1083 aa27.36■■□□□ 1.97
SPHK1-210ENST00000592299 RAI14Q9P0K7 980 aa27.36■■□□□ 1.97
SPHK1-210ENST00000592299 M0R2C6 588 aa27.35■■□□□ 1.97
SPHK1-210ENST00000592299 PTGER2P43116 358 aa27.35■■□□□ 1.97
SPHK1-210ENST00000592299 EYA3Q99504 573 aa27.35■■□□□ 1.97
SPHK1-210ENST00000592299 CC2D2BQ6DHV5 1058 aa27.34■■□□□ 1.97
SPHK1-210ENST00000592299 KIF2CQ99661 725 aa27.34■■□□□ 1.97
SPHK1-210ENST00000592299 PUS7LQ9H0K6 701 aaKnown RBP27.34■■□□□ 1.97
SPHK1-210ENST00000592299 DDRGK1Q96HY6 314 aa27.34■■□□□ 1.97
SPHK1-210ENST00000592299 ZBTB22O15209 634 aa27.33■■□□□ 1.97
SPHK1-210ENST00000592299 IL1R1P14778 569 aa27.33■■□□□ 1.97
SPHK1-210ENST00000592299 MAP4K1Q92918 833 aa27.33■■□□□ 1.97
SPHK1-210ENST00000592299 PIM2Q9P1W9 311 aa27.33■■□□□ 1.97
SPHK1-210ENST00000592299 TCRBV5S4A2TA0A5A2 114 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 G3V3G9 751 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 HSPA4P34932 840 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 DCAF8Q5TAQ9 597 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 WDR66Q8TBY9 1149 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 ERICH6Q7L0X2 663 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 COA1Q9GZY4 146 aa27.32■■□□□ 1.96
SPHK1-210ENST00000592299 RBM8AQ9Y5S9 174 aaKnown RBP27.32■■□□□ 1.96
SPHK1-210ENST00000592299 IPO9Q96P70 1041 aaKnown RBP27.31■■□□□ 1.96
SPHK1-210ENST00000592299 PALD1Q9ULE6 856 aa27.31■■□□□ 1.96
SPHK1-210ENST00000592299 CD2APQ9Y5K6 639 aa27.31■■□□□ 1.96
SPHK1-210ENST00000592299 GPAA1O43292 621 aa27.3■■□□□ 1.96
SPHK1-210ENST00000592299 DOK7Q18PE1 504 aa27.3■■□□□ 1.96
SPHK1-210ENST00000592299 CCDC93Q567U6 631 aa27.3■■□□□ 1.96
SPHK1-210ENST00000592299 VPS53Q5VIR6 699 aa27.3■■□□□ 1.96
SPHK1-210ENST00000592299 ZGPATQ8N5A5 531 aaKnown RBP27.3■■□□□ 1.96
SPHK1-210ENST00000592299 SPON1Q9HCB6 807 aa27.3■■□□□ 1.96
SPHK1-210ENST00000592299 KIAA1551Q9HCM1 1747 aa27.29■■□□□ 1.96
SPHK1-210ENST00000592299 CYP7A1P22680 504 aa27.29■■□□□ 1.96
SPHK1-210ENST00000592299 PRDX5P30044 214 aa27.29■■□□□ 1.96
SPHK1-210ENST00000592299 RTFDC1Q9BY42 306 aaPredicted RBP27.29■■□□□ 1.96
SPHK1-210ENST00000592299 SPTY2D1Q68D10 685 aaPredicted RBP27.28■■□□□ 1.96
SPHK1-210ENST00000592299 AIDAQ96BJ3 306 aa27.28■■□□□ 1.96
SPHK1-210ENST00000592299 HSPD1P10809 573 aaKnown RBP27.27■■□□□ 1.96
SPHK1-210ENST00000592299 ANAPC15P60006 121 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 GRIPAP1Q4V328 841 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 SALL1Q9NSC2 1324 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 NECTIN1Q15223 517 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 DALRD3Q5D0E6 543 aaKnown RBP27.27■■□□□ 1.96
SPHK1-210ENST00000592299 NAA16Q6N069 864 aaPredicted RBP27.27■■□□□ 1.96
SPHK1-210ENST00000592299 RTKN2Q8IZC4 609 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 SUPT20HQ8NEM7 779 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 DSCC1Q9BVC3 393 aa27.27■■□□□ 1.96
SPHK1-210ENST00000592299 SNED1Q8TER0 1413 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 LDHBP07195 334 aaKnown RBP27.25■■□□□ 1.95
SPHK1-210ENST00000592299 GTF2IP78347 998 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 MECOMQ03112 1051 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 RABEP1Q15276 862 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 DZIP1Q86YF9 867 aaKnown RBP27.25■■□□□ 1.95
SPHK1-210ENST00000592299 FBXW7Q969H0 707 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 NSUN4Q96CB9 384 aaKnown RBP27.25■■□□□ 1.95
SPHK1-210ENST00000592299 DBNDD1Q9H9R9 158 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 U3KPZ7 1027 aaPredicted RBP27.25■■□□□ 1.95
SPHK1-210ENST00000592299 RNF20Q5VTR2 975 aa27.25■■□□□ 1.95
SPHK1-210ENST00000592299 CREB3L3Q68CJ9 461 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms