RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 MVPQ14764 893 aaKnown RBP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 GMLQ99445 158 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 GLIS2Q9BZE0 524 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-227ENST00000591849 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 DDX19BQ9UMR2 479 aa12.47□□□□□ -0.41
BRCA1-227ENST00000591849 LTBP1Q14766 1721 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 IRS2Q9Y4H2 1338 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
BRCA1-227ENST00000591849 TFCP2Q12800 502 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 DLGAP5Q15398 846 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 COL13A1Q5TAT6 717 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-227ENST00000591849 KRT26Q7Z3Y9 468 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 NEUROD6Q96NK8 337 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
BRCA1-227ENST00000591849 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
BRCA1-227ENST00000591849 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.42
BRCA1-227ENST00000591849 PASKQ96RG2 1323 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 TRAF5O00463 557 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 EGFRP00533 1210 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
BRCA1-227ENST00000591849 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
BRCA1-227ENST00000591849 FGFR2P21802 821 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
BRCA1-227ENST00000591849 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 GGA3Q9NZ52 723 aa12.45□□□□□ -0.42
BRCA1-227ENST00000591849 FAM205AQ6ZU69 1335 aa12.44□□□□□ -0.42
BRCA1-227ENST00000591849 MYO1BO43795 1136 aa12.44□□□□□ -0.42
BRCA1-227ENST00000591849 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
BRCA1-227ENST00000591849 TIMM10P62072 90 aa12.44□□□□□ -0.42
BRCA1-227ENST00000591849 ANGEL2Q5VTE6 544 aaKnown RBP12.44□□□□□ -0.42
BRCA1-227ENST00000591849 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-227ENST00000591849 TNS4Q8IZW8 715 aa12.44□□□□□ -0.42
BRCA1-227ENST00000591849 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
BRCA1-227ENST00000591849 HMMRO75330 724 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 FMR1Q06787 632 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRCA1-227ENST00000591849 POLA2Q14181 598 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 WDR66Q8TBY9 1149 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 TTF2Q9UNY4 1162 aaKnown RBP12.43□□□□□ -0.42
BRCA1-227ENST00000591849 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
BRCA1-227ENST00000591849 THSD7BQ9C0I4 1608 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 A0A1B0GUL7 405 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 ADM5C9JUS6 153 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 CFAP100Q494V2 611 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-227ENST00000591849 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
BRCA1-227ENST00000591849 ASTN2O75129 1339 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-227ENST00000591849 WNT10BO00744 389 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 ZNF609O15014 1411 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 ADORA1P30542 326 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 PHKA1P46020 1223 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 GRM1Q13255 1194 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 CCDC102BQ68D86 513 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 C2orf69Q8N8R5 385 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 XAGE2Q96GT9 111 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 BCL11AQ9H165 835 aa12.41□□□□□ -0.42
BRCA1-227ENST00000591849 SEMA3EO15041 775 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 NF2P35240 595 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 C20orf194Q5TEA3 1177 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 CST9Q5W186 159 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 APOBEC3FQ8IUX4 373 aaKnown RBP12.4□□□□□ -0.42
BRCA1-227ENST00000591849 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 ZBTB40Q9NUA8 1239 aa12.4□□□□□ -0.42
BRCA1-227ENST00000591849 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 MAST3O60307 1309 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 PITPNM2Q9BZ72 1349 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 CLRN2A0PK11 232 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 APBB1O00213 710 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-227ENST00000591849 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
BRCA1-227ENST00000591849 TEKT1Q969V4 418 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 CDCA5Q96FF9 252 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 SCAF8Q9UPN6 1271 aaKnown RBP12.39□□□□□ -0.43
BRCA1-227ENST00000591849 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
BRCA1-227ENST00000591849 SUGT1Q9Y2Z0 365 aa12.39□□□□□ -0.43
BRCA1-227ENST00000591849 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
BRCA1-227ENST00000591849 UQCRFS1P1P0C7P4 283 aa12.38□□□□□ -0.43
BRCA1-227ENST00000591849 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms