RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 C8orf76Q96K31 380 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 ZMYND15Q9H091 742 aa19.63■□□□□ 0.73
CTDP1-207ENST00000591598 FOXP2O15409 715 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 LRRFIP1Q32MZ4 808 aaKnown RBP19.62■□□□□ 0.73
CTDP1-207ENST00000591598 SDF4Q9BRK5 362 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 ANKRD18BA2A2Z9 1011 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 FDPSP14324 419 aaKnown RBP19.62■□□□□ 0.73
CTDP1-207ENST00000591598 ADD1P35611 737 aaKnown RBP19.62■□□□□ 0.73
CTDP1-207ENST00000591598 NLRP10Q86W26 655 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 TTLL11Q8NHH1 800 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 APPBP2Q92624 585 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
CTDP1-207ENST00000591598 C11orf57Q6ZUT1 292 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-207ENST00000591598 SOS2Q07890 1332 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-207ENST00000591598 BECN2A8MW95 431 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 PHKA1P46020 1223 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 TRDNQ13061 729 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 NAA16Q6N069 864 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-207ENST00000591598 GIGYF2Q6Y7W6 1299 aaKnown RBP19.61■□□□□ 0.73
CTDP1-207ENST00000591598 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-207ENST00000591598 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 TOMM22Q9NS69 142 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 MAP3K15Q6ZN16 1313 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 STK38Q15208 465 aa19.61■□□□□ 0.73
CTDP1-207ENST00000591598 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 NCOA7Q8NI08 942 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 NKX2-3Q8TAU0 364 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 SLC4A9Q96Q91 983 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 MYL10Q9BUA6 226 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 KCPQ6ZWJ8 1503 aa19.6■□□□□ 0.73
CTDP1-207ENST00000591598 ILDR1Q86SU0 546 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-207ENST00000591598 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-207ENST00000591598 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.59■□□□□ 0.73
CTDP1-207ENST00000591598 BIN1O00499 593 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 CTSWP56202 376 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 ISM2Q6H9L7 571 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 PIH1D3Q9NQM4 214 aaKnown RBP19.59■□□□□ 0.73
CTDP1-207ENST00000591598 CLIC4Q9Y696 253 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 ACSBG1Q96GR2 724 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 IQSEC3Q9UPP2 1182 aaPredicted RBP19.59■□□□□ 0.73
CTDP1-207ENST00000591598 RIPOR2Q9Y4F9 1068 aa19.59■□□□□ 0.73
CTDP1-207ENST00000591598 PKD1L3Q7Z443 1732 aa19.58■□□□□ 0.73
CTDP1-207ENST00000591598 B4E1Z4 1266 aa19.58■□□□□ 0.73
CTDP1-207ENST00000591598 ZFYP08048 801 aaPredicted RBP19.58■□□□□ 0.73
CTDP1-207ENST00000591598 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.73
CTDP1-207ENST00000591598 CLIP2Q9UDT6 1046 aa19.58■□□□□ 0.73
CTDP1-207ENST00000591598 RCOR1Q9UKL0 485 aa19.58■□□□□ 0.73
CTDP1-207ENST00000591598 WWC3Q9ULE0 1092 aa19.58■□□□□ 0.73
CTDP1-207ENST00000591598 ANTXR2P58335 489 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 GNL2Q13823 731 aaKnown RBP19.58■□□□□ 0.72
CTDP1-207ENST00000591598 RRP12Q5JTH9 1297 aaKnown RBP19.58■□□□□ 0.72
CTDP1-207ENST00000591598 NFXL1Q6ZNB6 911 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 CCDC82Q8N4S0 544 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 PHKBQ93100 1093 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 PKNOX2Q96KN3 472 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 PCDHA7Q9UN72 937 aa19.58■□□□□ 0.72
CTDP1-207ENST00000591598 MARCKSP29966 332 aaPredicted RBP19.57■□□□□ 0.72
CTDP1-207ENST00000591598 FILIP1Q7Z7B0 1213 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 SENP2Q9HC62 589 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 GLI3P10071 1580 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 ZRSR1Q15695 479 aaKnown RBP19.57■□□□□ 0.72
CTDP1-207ENST00000591598 TEX13AQ9BXU3 409 aaPredicted RBP19.57■□□□□ 0.72
CTDP1-207ENST00000591598 CSF1RP07333 972 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 C16orf45Q96MC5 204 aaPredicted RBP19.57■□□□□ 0.72
CTDP1-207ENST00000591598 AGXT2Q9BYV1 514 aa19.57■□□□□ 0.72
CTDP1-207ENST00000591598 ZNF75DP51815 510 aa19.56■□□□□ 0.72
CTDP1-207ENST00000591598 SYNE3Q6ZMZ3 975 aa19.56■□□□□ 0.72
CTDP1-207ENST00000591598 KIAA1524Q8TCG1 905 aa19.56■□□□□ 0.72
CTDP1-207ENST00000591598 AIDAQ96BJ3 306 aa19.56■□□□□ 0.72
CTDP1-207ENST00000591598 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
CTDP1-207ENST00000591598 MB21D2Q8IYB1 491 aaPredicted RBP19.56■□□□□ 0.72
CTDP1-207ENST00000591598 ARID5BQ14865 1188 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 SNW1Q13573 536 aaKnown RBP19.55■□□□□ 0.72
CTDP1-207ENST00000591598 HPS5Q9UPZ3 1129 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 EXOC5O00471 708 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
CTDP1-207ENST00000591598 ADAMTS2O95450 1211 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 CYP19A1P11511 503 aaPredicted RBP19.55■□□□□ 0.72
CTDP1-207ENST00000591598 NDUFA8P51970 172 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 FAM160A1Q05DH4 1040 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 GLIPR1L2Q4G1C9 344 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 SEC31BQ9NQW1 1179 aa19.55■□□□□ 0.72
CTDP1-207ENST00000591598 SALL1Q9NSC2 1324 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 PDE8BO95263 885 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 TRIM28Q13263 835 aaKnown RBP19.54■□□□□ 0.72
CTDP1-207ENST00000591598 CYB5R4Q7L1T6 521 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 KIF28PB7ZC32 967 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 ADD2P35612 726 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 AOPEPQ8N6M6 819 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 ZKSCAN3Q9BRR0 538 aa19.54■□□□□ 0.72
CTDP1-207ENST00000591598 CTDSPL2Q05D32 466 aa19.53■□□□□ 0.72
CTDP1-207ENST00000591598 STX1AQ16623 288 aa19.53■□□□□ 0.72
CTDP1-207ENST00000591598 MAGEB6Q8N7X4 407 aa19.53■□□□□ 0.72
CTDP1-207ENST00000591598 MRPS27Q92552 414 aaKnown RBP19.53■□□□□ 0.72
CTDP1-207ENST00000591598 PDE6AP16499 860 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms