RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CRYMQ14894 314 aa14.08□□□□□ -0.15
SMARCA4-217ENST00000591595 CC2D1AQ6P1N0 951 aaPredicted RBP14.08□□□□□ -0.15
SMARCA4-217ENST00000591595 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.15
SMARCA4-217ENST00000591595 GPTP24298 496 aa14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 EIF4A1P60842 406 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC192P0DO97 292 aa14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 FAM173BQ6P4H8 233 aa14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 ARMC2Q8NEN0 867 aa14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 SIL1Q9H173 461 aa14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 SUDS3Q9H7L9 328 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC8Q9H0W5 538 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 SH2B1Q9NRF2 756 aaPredicted RBP14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 BABAM1Q9NWV8 329 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 MTMR6Q9Y217 621 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 ZNF75DP51815 510 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 CWF19L2Q2TBE0 894 aaKnown RBP14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC93Q567U6 631 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 VPS53Q5VIR6 699 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 LMOD2Q6P5Q4 547 aa14.07□□□□□ -0.16
SMARCA4-217ENST00000591595 EME2A4GXA9 379 aaPredicted RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 KRT85P78386 507 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 STK3Q13188 491 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.162e-9■■■□□ 18.1
SMARCA4-217ENST00000591595 KDM4CQ9H3R0 1056 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 RBBP5Q15291 538 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 SF3A1Q15459 793 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 ME3Q16798 604 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC144BQ3MJ40 725 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 ARMC3Q5W041 872 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 LRRC8AQ8IWT6 810 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 FSD1Q9BTV5 496 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 SKILP12757 684 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 RPS6KA3P51812 740 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 CCAR2Q8N163 923 aaKnown RBP14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 ARFGAP3Q9NP61 516 aa14.06□□□□□ -0.16
SMARCA4-217ENST00000591595 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 PPFIA4O75335 1185 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 PLA2G4DQ86XP0 818 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 IL17RAQ96F46 866 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 FAM227BQ96M60 508 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 BAG1Q99933 345 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 BOLA2Q9H3K6 86 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC158Q5M9N0 1113 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 CKAP2LQ8IYA6 745 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 CCDC97Q96F63 343 aaPredicted RBP14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 TFIP11Q9UBB9 837 aaKnown RBP14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 NEMFO60524 1076 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 NUP62CLQ9H1M0 184 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 ODF2LQ9ULJ1 636 aa14.05□□□□□ -0.16
SMARCA4-217ENST00000591595 ICA1Q05084 483 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 CREB3L3Q68CJ9 461 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 BLOC1S2Q6QNY1 142 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 PSMA5P28066 241 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 LRRC59Q96AG4 307 aaKnown RBP14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 FUT8Q9BYC5 575 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 ZSWIM6Q9HCJ5 1215 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
SMARCA4-217ENST00000591595 FAM163BP0C2L3 166 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 GCKP35557 465 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 MAP3K11Q16584 847 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 RTN2O75298 545 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 EIF3JO75822 258 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 SNUPNO95149 360 aaKnown RBP14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 PDCP20941 246 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 TBC1D25Q3MII6 688 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 TCHHQ07283 1943 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 CCP110O43303 1012 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 ECEL1O95672 775 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 NFXL1Q6ZNB6 911 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 CDC37L1Q7L3B6 337 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 TNMDQ9H2S6 317 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 AKAP2Q9Y2D5 859 aa14.03□□□□□ -0.16
SMARCA4-217ENST00000591595 KCNA6P17658 529 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms