RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 CCDC184Q52MB2 194 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 INTS3Q68E01 1043 aaKnown RBP12.63□□□□□ -0.39
RETREG3-211ENST00000591547 UBE3BQ7Z3V4 1068 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-211ENST00000591547 EFCC1Q9HA90 598 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 VEZTQ9HBM0 779 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 CD209Q9NNX6 404 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 A0A1B0GUL6 1792 aa12.63□□□□□ -0.39
RETREG3-211ENST00000591547 SZT2Q5T011 3432 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 APAF1O14727 1248 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-211ENST00000591547 ITGA6P23229 1130 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
RETREG3-211ENST00000591547 INHBEP58166 350 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 CFAP100Q494V2 611 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 KSR2Q6VAB6 950 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
RETREG3-211ENST00000591547 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
RETREG3-211ENST00000591547 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
RETREG3-211ENST00000591547 H7C1W4 665 aa12.61□□□□□ -0.39
RETREG3-211ENST00000591547 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-211ENST00000591547 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-211ENST00000591547 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
RETREG3-211ENST00000591547 SP3Q02447 781 aa12.61□□□□□ -0.39
RETREG3-211ENST00000591547 CHRNDQ07001 517 aa12.61□□□□□ -0.39
RETREG3-211ENST00000591547 PTCH2Q9Y6C5 1203 aa12.61□□□□□ -0.39
RETREG3-211ENST00000591547 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
RETREG3-211ENST00000591547 KCNJ4P48050 445 aa12.6□□□□□ -0.39
RETREG3-211ENST00000591547 GNAI1P63096 354 aa12.6□□□□□ -0.39
RETREG3-211ENST00000591547 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
RETREG3-211ENST00000591547 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
RETREG3-211ENST00000591547 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 CASP7P55210 303 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 RASA3Q14644 834 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 MPHOSPH8Q99549 860 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
RETREG3-211ENST00000591547 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
RETREG3-211ENST00000591547 H0YGN5 161 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
RETREG3-211ENST00000591547 RBM5P52756 815 aaKnown RBP eCLIP12.58□□□□□ -0.4
RETREG3-211ENST00000591547 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 SUPT20HL1Q3ZLR7 823 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 SH3TC2Q8TF17 1288 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 BRI3BPQ8WY22 251 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 MS4A4AQ96JQ5 239 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 ARHGAP39Q9C0H5 1083 aa12.58□□□□□ -0.4
RETREG3-211ENST00000591547 CCER2I3L3R5 266 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 PLIN1O60240 522 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 CSF1RP07333 972 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 MMP14P50281 582 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 GCKRQ14397 625 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-211ENST00000591547 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
RETREG3-211ENST00000591547 IL1R1P14778 569 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 TAF1CQ15572 869 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-211ENST00000591547 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 MIER1Q8N108 512 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 FAM43AQ8N2R8 423 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-211ENST00000591547 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
RETREG3-211ENST00000591547 TDRD3Q9H7E2 651 aaKnown RBP12.56□□□□□ -0.4
RETREG3-211ENST00000591547 ZNF70Q9UC06 446 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-211ENST00000591547 CCL15-CCL14A0A0B4J2E2 113 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 MYO1BO43795 1136 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 GRIK5Q16478 980 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 CCL15Q16663 113 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
RETREG3-211ENST00000591547 ANKRD18BA2A2Z9 1011 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 FOXO4P98177 505 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 VGLL4Q14135 290 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 STK31Q9BXU1 1019 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
RETREG3-211ENST00000591547 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 CTGFP29279 349 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 CACNB3P54284 484 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 MTFR1Q15390 333 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
RETREG3-211ENST00000591547 EPHA10Q5JZY3 1008 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms