RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 ZNF541Q9H0D2 1346 aa22.43■■□□□ 1.18
CROCCP3-205ENST00000591316 MCAMP43121 646 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 RASGRF1Q13972 1273 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 SKAP1Q86WV1 359 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 GPATCH3Q96I76 525 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 ECHDC1Q9NTX5 307 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 NDUFB9Q9Y6M9 179 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 MX1P20591 662 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 ARID4AP29374 1257 aaPredicted RBP22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 TNIP1Q15025 636 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 DPY19L2Q6NUT2 758 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 HMG20BQ9P0W2 317 aa22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 ZBTB12Q9Y330 459 aaPredicted RBP22.42■■□□□ 1.18
CROCCP3-205ENST00000591316 DDNO94850 711 aaPredicted RBP22.41■■□□□ 1.18
CROCCP3-205ENST00000591316 PDE4AP27815 886 aa22.41■■□□□ 1.18
CROCCP3-205ENST00000591316 STRIP1Q5VSL9 837 aa22.41■■□□□ 1.18
CROCCP3-205ENST00000591316 SPATA5Q8NB90 893 aa22.41■■□□□ 1.18
CROCCP3-205ENST00000591316 SEMA3EO15041 775 aa22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 VIL1P09327 827 aaKnown RBP22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 ATP5JP18859 108 aa22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 ZAP70P43403 619 aa22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 PDE1AP54750 535 aa22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 PLEKHM2Q8IWE5 1019 aa22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 DNAJC2Q99543 621 aaKnown RBP22.39■■□□□ 1.18
CROCCP3-205ENST00000591316 MFSD14BQ5SR56 506 aa22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 DACT2Q5SW24 774 aa22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 TBC1D9Q6ZT07 1266 aa22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 RSBN1LQ6PCB5 846 aaPredicted RBP22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 WDR66Q8TBY9 1149 aa22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 ABCF2Q9UG63 623 aa22.38■■□□□ 1.17
CROCCP3-205ENST00000591316 CHD4Q14839 1912 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 TTC41PQ6P2S7 1318 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 FAM205AQ6ZU69 1335 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 SALL3Q9BXA9 1300 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 F8W031 263 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 ERC2O15083 957 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 MAP4K4O95819 1239 aaPredicted RBP22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 GPC2Q8N158 579 aa22.37■■□□□ 1.17
CROCCP3-205ENST00000591316 ARAP2Q8WZ64 1704 aa22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 GLTPD2A6NH11 291 aa22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 CERS5Q8N5B7 392 aa22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 EDC3Q96F86 508 aaKnown RBP22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 STAP2Q9UGK3 403 aa22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 DICER1Q9UPY3 1922 aaKnown RBP22.36■■□□□ 1.17
CROCCP3-205ENST00000591316 SCN9AQ15858 1988 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 CYP2E1P05181 493 aaPredicted RBP22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 RGS3P49796 1198 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 GRIK5Q16478 980 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 KIAA0825Q8IV33 1275 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 PI4K2BQ8TCG2 481 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 ZNF526Q8TF50 670 aaPredicted RBP22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 TBC1D22AQ8WUA7 517 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 ANTXR1Q9H6X2 564 aa22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 COL1A1P02452 1464 aaPredicted RBP22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 ZC3H4Q9UPT8 1303 aaKnown RBP22.35■■□□□ 1.17
CROCCP3-205ENST00000591316 GOLIM4O00461 696 aa22.34■■□□□ 1.17
CROCCP3-205ENST00000591316 GLRX3O76003 335 aaKnown RBP22.34■■□□□ 1.17
CROCCP3-205ENST00000591316 GMPSP49915 693 aaPredicted RBP22.34■■□□□ 1.17
CROCCP3-205ENST00000591316 HAUS7Q99871 368 aa22.34■■□□□ 1.17
CROCCP3-205ENST00000591316 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.17
CROCCP3-205ENST00000591316 PRDX5P30044 214 aa22.32■■□□□ 1.16
CROCCP3-205ENST00000591316 AGBL3Q8NEM8 1001 aa22.32■■□□□ 1.16
CROCCP3-205ENST00000591316 PIH1D3Q9NQM4 214 aaKnown RBP22.32■■□□□ 1.16
CROCCP3-205ENST00000591316 PAG1Q9NWQ8 432 aa22.32■■□□□ 1.16
CROCCP3-205ENST00000591316 CNOT7Q9UIV1 285 aaKnown RBP22.32■■□□□ 1.16
CROCCP3-205ENST00000591316 TIAM2Q8IVF5 1701 aa22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 SHTN1A0MZ66 631 aa22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 LDHBP07195 334 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 FKBP1AP62942 108 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 ERICH6Q7L0X2 663 aa22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 ZGPATQ8N5A5 531 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 OSBPL3Q9H4L5 887 aa22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 RAI14Q9P0K7 980 aa22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 TTF2Q9UNY4 1162 aaKnown RBP22.31■■□□□ 1.16
CROCCP3-205ENST00000591316 ZBTB22O15209 634 aa22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 IDH1O75874 414 aaKnown RBP22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 SCNN1DP51172 638 aa22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 GMLQ99445 158 aa22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 PDS5AQ29RF7 1337 aaKnown RBP22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 MYO3BQ8WXR4 1341 aa22.3■■□□□ 1.16
CROCCP3-205ENST00000591316 TRIM6-TRIM34B2RNG4 842 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 RPS12P25398 132 aaKnown RBP22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 RBM26Q5T8P6 1007 aaKnown RBP22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 SPTY2D1Q68D10 685 aaPredicted RBP22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 OGFOD1Q8N543 542 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 DPF2Q92785 391 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 SALL1Q9NSC2 1324 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 EPS15P42566 896 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 TTF1Q15361 905 aaPredicted RBP22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 MICALL2Q8IY33 904 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 RRAGCQ9HB90 399 aa22.29■■□□□ 1.16
CROCCP3-205ENST00000591316 H7C1D1 291 aa22.28■■□□□ 1.16
CROCCP3-205ENST00000591316 YY1P25490 414 aa22.28■■□□□ 1.16
CROCCP3-205ENST00000591316 LMOD1P29536 600 aaPredicted RBP22.28■■□□□ 1.16
CROCCP3-205ENST00000591316 RILPL2Q969X0 211 aa22.28■■□□□ 1.16
CROCCP3-205ENST00000591316 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
CROCCP3-205ENST00000591316 HDAC9Q9UKV0 1011 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms