RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
LSM12-204ENST00000591247 LPIN2Q92539 896 aa20.1■□□□□ 0.81
LSM12-204ENST00000591247 SLC9C2Q5TAH2 1124 aa20.09■□□□□ 0.81
LSM12-204ENST00000591247 DDX11Q96FC9 970 aa20.09■□□□□ 0.81
LSM12-204ENST00000591247 CTDNEP1O95476 244 aa20.09■□□□□ 0.81
LSM12-204ENST00000591247 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
LSM12-204ENST00000591247 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
LSM12-204ENST00000591247 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.09■□□□□ 0.81
LSM12-204ENST00000591247 CTNNA3Q9UI47 895 aa20.09■□□□□ 0.81
LSM12-204ENST00000591247 COL5A3P25940 1745 aaPredicted RBP20.08■□□□□ 0.81
LSM12-204ENST00000591247 KCNQ4P56696 695 aa20.08■□□□□ 0.81
LSM12-204ENST00000591247 IMMTQ16891 758 aaKnown RBP20.08■□□□□ 0.8
LSM12-204ENST00000591247 TTC6Q86TZ1 520 aa20.08■□□□□ 0.8
LSM12-204ENST00000591247 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.8
LSM12-204ENST00000591247 NSUN7Q8NE18 718 aaKnown RBP20.08■□□□□ 0.8
LSM12-204ENST00000591247 GPHNQ9NQX3 736 aaPredicted RBP20.08■□□□□ 0.8
LSM12-204ENST00000591247 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 IDH1O75874 414 aaKnown RBP20.07■□□□□ 0.8
LSM12-204ENST00000591247 TTF1Q15361 905 aaPredicted RBP20.07■□□□□ 0.8
LSM12-204ENST00000591247 PTF1AQ7RTS3 328 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 FAM13BQ9NYF5 915 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 BCL9LQ86UU0 1499 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 CCT2P78371 535 aaKnown RBP20.07■□□□□ 0.8
LSM12-204ENST00000591247 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 CCDC183Q5T5S1 534 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 ZKSCAN5Q9Y2L8 839 aa20.07■□□□□ 0.8
LSM12-204ENST00000591247 UQCRFS1P1P0C7P4 283 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 PDIA3P30101 505 aaKnown RBP20.06■□□□□ 0.8
LSM12-204ENST00000591247 MCM5P33992 734 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 KRT85P78386 507 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 ZSCAN25Q6NSZ9 544 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 RNF214Q8ND24 703 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 LLPHQ9BRT6 129 aaKnown RBP20.06■□□□□ 0.8
LSM12-204ENST00000591247 TSPY26PQ9H489 355 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 NCOA5Q9HCD5 579 aaKnown RBP20.06■□□□□ 0.8
LSM12-204ENST00000591247 COL4A1P02462 1669 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 ZNF532Q9HCE3 1301 aa20.06■□□□□ 0.8
LSM12-204ENST00000591247 ATRNO75882 1429 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 TCRBV5S4A2TA0A5A2 114 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 PHF14O94880 888 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 SLC5A1P13866 664 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 PDE6AP16499 860 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 UBE3CQ15386 1083 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
LSM12-204ENST00000591247 RASGRF1Q13972 1273 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 SMIM5Q71RC9 77 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 FBXL16Q8N461 479 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 SPATA5Q8NB90 893 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 UQCRHLA0A096LP55 91 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 PTPDC1A2A3K4 754 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 UQCRHP07919 91 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 RESTQ13127 1097 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 VPS72Q15906 364 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 MB21D2Q8IYB1 491 aaPredicted RBP20.04■□□□□ 0.8
LSM12-204ENST00000591247 ZNF274Q96GC6 653 aaPredicted RBP20.04■□□□□ 0.8
LSM12-204ENST00000591247 NBPF3Q9H094 633 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 TFIP11Q9UBB9 837 aaKnown RBP20.04■□□□□ 0.8
LSM12-204ENST00000591247 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
LSM12-204ENST00000591247 NAP1L2Q9ULW6 460 aaPredicted RBP20.03■□□□□ 0.8
LSM12-204ENST00000591247 RTL9Q8NET4 1388 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 LAMB2P55268 1798 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 ZNF213O14771 459 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 ANTXR2P58335 489 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
LSM12-204ENST00000591247 IGHMBP2P38935 993 aaKnown RBP20.02■□□□□ 0.8
LSM12-204ENST00000591247 EVCP57679 992 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 DENND2AQ9ULE3 1009 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 ZNF652Q9Y2D9 606 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 ELP1O95163 1332 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 PRC1O43663 620 aa20.02■□□□□ 0.8
LSM12-204ENST00000591247 H3BQV1 296 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 BCAMP50895 628 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 IFFO2Q5TF58 517 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 MTERF4Q7Z6M4 381 aaKnown RBP20.01■□□□□ 0.79
LSM12-204ENST00000591247 ZNF831Q5JPB2 1677 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 UBAP1LF5GYI3 381 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 DYNC1I1O14576 645 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 FOSBP53539 338 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 CHRNDQ07001 517 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 ERFEQ4G0M1 354 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 NCOA7Q8NI08 942 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
LSM12-204ENST00000591247 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
LSM12-204ENST00000591247 HMGN5P82970 282 aaKnown RBP20■□□□□ 0.79
LSM12-204ENST00000591247 TBC1D10CQ8IV04 446 aa20■□□□□ 0.79
LSM12-204ENST00000591247 STRBPQ96SI9 672 aaKnown RBP20■□□□□ 0.79
LSM12-204ENST00000591247 MAGEB6Q8N7X4 407 aa19.99■□□□□ 0.79
LSM12-204ENST00000591247 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
LSM12-204ENST00000591247 SCAND2PQ9GZW5 306 aaPredicted RBP19.99■□□□□ 0.79
LSM12-204ENST00000591247 DOCK2Q92608 1830 aa19.99■□□□□ 0.79
LSM12-204ENST00000591247 LETM1O95202 739 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms