RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ZNF397Q8NF99 534 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 IQSEC3Q9UPP2 1182 aaPredicted RBP19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 ANO1Q5XXA6 986 aa19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 MKNK2Q9HBH9 465 aa19.65■□□□□ 0.74
SMARCA4-215ENST00000590574 IKQ13123 557 aaPredicted RBP19.64■□□□□ 0.74
SMARCA4-215ENST00000590574 SAMD1Q6SPF0 538 aaPredicted RBP19.64■□□□□ 0.74
SMARCA4-215ENST00000590574 ADGRB1O14514 1584 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 EXOC5O00471 708 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 A1BGP04217 495 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 IL2RBP14784 551 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 MAGEB6Q8N7X4 407 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 DSCC1Q9BVC3 393 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 ELP1O95163 1332 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 ZNF589Q86UQ0 364 aaPredicted RBP19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 CCDC191Q8NCU4 936 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
SMARCA4-215ENST00000590574 YEATS4O95619 227 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 CYP7A1P22680 504 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 GBP3Q9H0R5 595 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 TAF5LO75529 589 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 MRVI1Q9Y6F6 885 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 IRS4O14654 1257 aaPredicted RBP19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 LRMPQ12912 555 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 CCDC194A0A1B0GVG4 234 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 IGSF3O75054 1194 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 SSBP05455 408 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 IQCEQ6IPM2 695 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 PYCARDQ9ULZ3 195 aa19.63■□□□□ 0.73
SMARCA4-215ENST00000590574 B4E1Z4 1266 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 DZIP1Q86YF9 867 aaKnown RBP19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 BCL2L12Q9HB09 334 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 DHX58Q96C10 678 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 GPAA1O43292 621 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 SLC4A8Q2Y0W8 1093 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 SMAP1Q8IYB5 467 aaPredicted RBP19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 APPBP2Q92624 585 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 MYL5Q02045 173 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 ESR2Q92731 530 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 HAUS7Q99871 368 aa19.62■□□□□ 0.73
SMARCA4-215ENST00000590574 OGFRQ9NZT2 677 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 MROH2AA6NES4 1674 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 PFKFB2O60825 505 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 UTP14AQ9BVJ6 771 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 N4BP3O15049 544 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 TUBB4AP04350 444 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 CCDC152Q4G0S7 254 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 USP28Q96RU2 1077 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 CDC5LQ99459 802 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 DBNLQ9UJU6 430 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 GTF2F1P35269 517 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 TCEAL9Q9UHQ7 104 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 ADCY9O60503 1353 aa19.61■□□□□ 0.73
SMARCA4-215ENST00000590574 ZNF202O95125 648 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 MIGA1Q8NAN2 632 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 FEZ1Q99689 392 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 ZKSCAN3Q9BRR0 538 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 CYP2E1P05181 493 aaPredicted RBP19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 SCRN1Q12765 414 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 RRAGBQ5VZM2 374 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 GTPBP4Q9BZE4 634 aaKnown RBP19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 KRI1Q8N9T8 703 aaKnown RBP19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 PHKG2P15735 406 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 SPA17Q15506 151 aa19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 LUC7LQ9NQ29 371 aaKnown RBP19.6■□□□□ 0.73
SMARCA4-215ENST00000590574 TSPY2A6NKD2 308 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 ITGA6P23229 1130 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 ANGEL1Q9UNK9 670 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 FKBP15Q5T1M5 1219 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 SEC63Q9UGP8 760 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 DDIT3P35638 169 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 TXLNBQ8N3L3 684 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 TMEM87AQ8NBN3 555 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 ZAP70P43403 619 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 NECTIN1Q15223 517 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 ERO1AQ96HE7 468 aa19.59■□□□□ 0.73
SMARCA4-215ENST00000590574 MBD4O95243 580 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 FANCCQ00597 558 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 TRIM75PA6NK02 468 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 NLRP12P59046 1061 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 ZNF444Q8N0Y2 327 aaPredicted RBP19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 CTAGE1Q96RT6 745 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 SRRTQ9BXP5 876 aaKnown RBP19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 COPRSQ9NQ92 184 aa19.58■□□□□ 0.73
SMARCA4-215ENST00000590574 HSPD1P10809 573 aaKnown RBP19.58■□□□□ 0.72
SMARCA4-215ENST00000590574 KIF5BP33176 963 aa19.58■□□□□ 0.72
SMARCA4-215ENST00000590574 STX17P56962 302 aa19.58■□□□□ 0.72
SMARCA4-215ENST00000590574 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.72
SMARCA4-215ENST00000590574 POTEB2H3BUK9 544 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 SASH1O94885 1247 aa19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 BMP2KQ9NSY1 1161 aaPredicted RBP19.57■□□□□ 0.72
SMARCA4-215ENST00000590574 ZNF274Q96GC6 653 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms