RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MTX1Q13505 466 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 HSP90B2PQ58FF3 399 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 KIRREL3Q8IZU9 778 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
CIRBP-228ENST00000590347 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
CIRBP-228ENST00000590347 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 TECPR2O15040 1411 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 SLC27A2O14975 620 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 UBASH3AP57075 661 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 FLIIQ13045 1269 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 MRFAP1Q9Y605 127 aa17.5■□□□□ 0.39
CIRBP-228ENST00000590347 ERLIN2O94905 339 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 TXLNAP40222 546 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 BEND6Q5SZJ8 279 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 IQUBQ8NA54 791 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 ZMYND10O75800 440 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 HNRNPH1P31943 449 aaKnown RBP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 VSNL1P62760 191 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
CIRBP-228ENST00000590347 ANKZF1Q9H8Y5 726 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 DONSONQ9NYP3 566 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 SAMM50Q9Y512 469 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 USP6P35125 1406 aa17.49■□□□□ 0.39
CIRBP-228ENST00000590347 CHL1O00533 1208 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-228ENST00000590347 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
CIRBP-228ENST00000590347 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-228ENST00000590347 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
CIRBP-228ENST00000590347 ANKLE2Q86XL3 938 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 FANCLQ9NW38 375 aa17.48■□□□□ 0.39
CIRBP-228ENST00000590347 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-228ENST00000590347 MAP2K7O14733 419 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 TPM1P09493 284 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 CPLX3Q8WVH0 158 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 GJB4Q9NTQ9 266 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 ATP8B1O43520 1251 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 FKBP15Q5T1M5 1219 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 IMPACTQ9P2X3 320 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 EXOC5O00471 708 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 ANXA1P04083 346 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 A1BGP04217 495 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 FAM160A1Q05DH4 1040 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 SF3A1Q15459 793 aaKnown RBP17.47■□□□□ 0.39
CIRBP-228ENST00000590347 RABGGTAQ92696 567 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 EYA1Q99502 592 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
CIRBP-228ENST00000590347 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 TOP1P11387 765 aaKnown RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 CASP8Q14790 479 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 CHST3Q7LGC8 479 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 HDXQ7Z353 690 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 GSPT2Q8IYD1 628 aaKnown RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 MRPL44Q9H9J2 332 aaKnown RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
CIRBP-228ENST00000590347 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 PHAXQ9H814 394 aaKnown RBP17.46■□□□□ 0.39
CIRBP-228ENST00000590347 CCDC151A5D8V7 595 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 RNF40O75150 1001 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 CAVIN2O95810 425 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 ADD1P35611 737 aaKnown RBP17.45■□□□□ 0.38
CIRBP-228ENST00000590347 PRPF38AQ8NAV1 312 aaKnown RBP17.45■□□□□ 0.38
CIRBP-228ENST00000590347 CD248Q9HCU0 757 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 MYO1FO00160 1098 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-228ENST00000590347 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-228ENST00000590347 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
CIRBP-228ENST00000590347 NCAPHQ15003 741 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 Q6ZUG5 572 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 CENPHQ9H3R5 247 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 C3P01024 1663 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 ABL1P00519 1130 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 RPS6KB1P23443 525 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 CCDC129Q6ZRS4 1044 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 EFCAB13Q8IY85 973 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 KCND1Q9NSA2 647 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 KIAA1468Q9P260 1216 aa17.44■□□□□ 0.38
CIRBP-228ENST00000590347 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms