RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
ACTN4-211ENST00000589528 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■■□□ 15
ACTN4-211ENST00000589528 G2E3Q7L622 706 aa19.43■□□□□ 0.7
ACTN4-211ENST00000589528 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
ACTN4-211ENST00000589528 CENPFP49454 3210 aa19.43■□□□□ 0.7
ACTN4-211ENST00000589528 LAMB1P07942 1786 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 CLRN2A0PK11 232 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 IREB2P48200 963 aaKnown RBP19.42■□□□□ 0.7
ACTN4-211ENST00000589528 FLIIQ13045 1269 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
ACTN4-211ENST00000589528 MAP3K11Q16584 847 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 CFAP100Q494V2 611 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
ACTN4-211ENST00000589528 OTOP1Q7RTM1 612 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 ERO1AQ96HE7 468 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 CLMNQ96JQ2 1002 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 A0A1B0GUL6 1792 aa19.42■□□□□ 0.7
ACTN4-211ENST00000589528 MKI67P46013 3256 aaKnown RBP19.42■□□□□ 0.7
ACTN4-211ENST00000589528 KIAA0100Q14667 2235 aaKnown RBP19.41■□□□□ 0.7
ACTN4-211ENST00000589528 TAF5LO75529 589 aa19.41■□□□□ 0.7
ACTN4-211ENST00000589528 CSF1RP07333 972 aa19.41■□□□□ 0.7
ACTN4-211ENST00000589528 MTMR14Q8NCE2 650 aa19.41■□□□□ 0.7
ACTN4-211ENST00000589528 HELBQ8NG08 1087 aaPredicted RBP19.41■□□□□ 0.7
ACTN4-211ENST00000589528 UNCXA6NJT0 531 aa19.4■□□□□ 0.7
ACTN4-211ENST00000589528 IGF2BP3O00425 579 aaKnown RBP eCLIP19.4■□□□□ 0.71e-6■■■□□ 14.7
ACTN4-211ENST00000589528 CERS5Q8N5B7 392 aa19.4■□□□□ 0.7
ACTN4-211ENST00000589528 LINS1Q8NG48 757 aa19.4■□□□□ 0.7
ACTN4-211ENST00000589528 HTTP42858 3142 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 SPDYE2BA6NHP3 402 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 SNAP23O00161 211 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 SPDYE6P0CI01 402 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 CASP7P55210 303 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 TAF7LQ5H9L4 462 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 PCDHAC2Q9Y5I4 1007 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 SSC5DA1L4H1 1573 aa19.39■□□□□ 0.69
ACTN4-211ENST00000589528 TNFAIP1Q13829 316 aa19.38■□□□□ 0.69
ACTN4-211ENST00000589528 NBPF12Q5TAG4 269 aaPredicted RBP19.38■□□□□ 0.69
ACTN4-211ENST00000589528 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
ACTN4-211ENST00000589528 RBBP6Q7Z6E9 1792 aaKnown RBP19.38■□□□□ 0.69
ACTN4-211ENST00000589528 ANKRD13AQ8IZ07 590 aa19.38■□□□□ 0.69
ACTN4-211ENST00000589528 CD99L2Q8TCZ2 262 aa19.38■□□□□ 0.69
ACTN4-211ENST00000589528 JAG2Q9Y219 1238 aa19.38■□□□□ 0.69
ACTN4-211ENST00000589528 POTEFA5A3E0 1075 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 PLIN1O60240 522 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 IL1R1P14778 569 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
ACTN4-211ENST00000589528 CRHR2Q13324 411 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 WWC1Q8IX03 1113 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 PRMT6Q96LA8 375 aaPredicted RBP19.37■□□□□ 0.69
ACTN4-211ENST00000589528 EFCC1Q9HA90 598 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 PTPN22Q9Y2R2 807 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 OTOFQ9HC10 1997 aa19.37■□□□□ 0.69
ACTN4-211ENST00000589528 RASA3Q14644 834 aa19.36■□□□□ 0.69
ACTN4-211ENST00000589528 CCDC27Q2M243 656 aa19.36■□□□□ 0.69
ACTN4-211ENST00000589528 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
ACTN4-211ENST00000589528 SP3Q02447 781 aa19.35■□□□□ 0.69
ACTN4-211ENST00000589528 CNNM1Q9NRU3 951 aa19.35■□□□□ 0.69
ACTN4-211ENST00000589528 IRS2Q9Y4H2 1338 aa19.34■□□□□ 0.69
ACTN4-211ENST00000589528 USP2O75604 605 aaPredicted RBP19.34■□□□□ 0.69
ACTN4-211ENST00000589528 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
ACTN4-211ENST00000589528 OPTNQ96CV9 577 aa19.34■□□□□ 0.69
ACTN4-211ENST00000589528 ELP3Q9H9T3 547 aa19.34■□□□□ 0.69
ACTN4-211ENST00000589528 IL16Q14005 1332 aa19.33■□□□□ 0.69
ACTN4-211ENST00000589528 BRCA2P51587 3418 aa19.33■□□□□ 0.69
ACTN4-211ENST00000589528 GJA5P36382 358 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 FOXO4P98177 505 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 ARHGEF6Q15052 776 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 HABP4Q5JVS0 413 aaKnown RBP19.33■□□□□ 0.68
ACTN4-211ENST00000589528 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 LMBR1LQ6UX01 489 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 TMEM106CQ9BVX2 250 aa19.33■□□□□ 0.68
ACTN4-211ENST00000589528 ZNF594Q96JF6 807 aaPredicted RBP19.32■□□□□ 0.68
ACTN4-211ENST00000589528 TTF2Q9UNY4 1162 aaKnown RBP19.32■□□□□ 0.68
ACTN4-211ENST00000589528 ARAP2Q8WZ64 1704 aa19.31■□□□□ 0.68
ACTN4-211ENST00000589528 TNNI2P48788 182 aa19.31■□□□□ 0.68
ACTN4-211ENST00000589528 TAF1CQ15572 869 aaPredicted RBP19.31■□□□□ 0.68
ACTN4-211ENST00000589528 PTPN18Q99952 460 aa19.31■□□□□ 0.68
ACTN4-211ENST00000589528 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
ACTN4-211ENST00000589528 ZNF70Q9UC06 446 aaPredicted RBP19.31■□□□□ 0.68
ACTN4-211ENST00000589528 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
ACTN4-211ENST00000589528 AOX1Q06278 1338 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 F6X3S4 739 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-211ENST00000589528 EN2P19622 333 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-211ENST00000589528 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 ARMC5Q96C12 935 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 ZFYVE28Q9HCC9 887 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 C9orf78Q9NZ63 289 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-211ENST00000589528 CSADQ9Y600 493 aa19.3■□□□□ 0.68
ACTN4-211ENST00000589528 FAM205AQ6ZU69 1335 aa19.29■□□□□ 0.68
ACTN4-211ENST00000589528 TESPA1A2RU30 521 aaPredicted RBP19.29■□□□□ 0.68
ACTN4-211ENST00000589528 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
ACTN4-211ENST00000589528 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
ACTN4-211ENST00000589528 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
ACTN4-211ENST00000589528 CCL15-CCL14A0A0B4J2E2 113 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 GRM8O00222 908 aa19.28■□□□□ 0.68
ACTN4-211ENST00000589528 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms