RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
LINC01140-209ENST00000589455 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
LINC01140-209ENST00000589455 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
LINC01140-209ENST00000589455 IRS2Q9Y4H2 1338 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 SPDYE2BA6NHP3 402 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 SPDYE6P0CI01 402 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 IL1R1P14778 569 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 CASP7P55210 303 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 CERS5Q8N5B7 392 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 EFCC1Q9HA90 598 aa20.08■□□□□ 0.81
LINC01140-209ENST00000589455 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
LINC01140-209ENST00000589455 SP3Q02447 781 aa20.07■□□□□ 0.8
LINC01140-209ENST00000589455 CRHR2Q13324 411 aa20.07■□□□□ 0.8
LINC01140-209ENST00000589455 ARHGEF6Q15052 776 aa20.07■□□□□ 0.8
LINC01140-209ENST00000589455 CFAP100Q494V2 611 aa20.07■□□□□ 0.8
LINC01140-209ENST00000589455 PRMT6Q96LA8 375 aaPredicted RBP20.07■□□□□ 0.8
LINC01140-209ENST00000589455 USP2O75604 605 aaPredicted RBP20.06■□□□□ 0.8
LINC01140-209ENST00000589455 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
LINC01140-209ENST00000589455 NBPF12Q5TAG4 269 aaPredicted RBP20.06■□□□□ 0.8
LINC01140-209ENST00000589455 ZNF804AQ7Z570 1209 aa20.06■□□□□ 0.8
LINC01140-209ENST00000589455 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
LINC01140-209ENST00000589455 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
LINC01140-209ENST00000589455 CD99L2Q8TCZ2 262 aa20.05■□□□□ 0.8
LINC01140-209ENST00000589455 PTPN18Q99952 460 aa20.05■□□□□ 0.8
LINC01140-209ENST00000589455 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
LINC01140-209ENST00000589455 ZNF646O15015 1829 aaPredicted RBP20.04■□□□□ 0.8
LINC01140-209ENST00000589455 TNFAIP1Q13829 316 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 RASA3Q14644 834 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 TWISTNBQ3B726 338 aaPredicted RBP20.04■□□□□ 0.8
LINC01140-209ENST00000589455 G2E3Q7L622 706 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 TMEM106CQ9BVX2 250 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 HTTP42858 3142 aa20.04■□□□□ 0.8
LINC01140-209ENST00000589455 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
LINC01140-209ENST00000589455 GJA5P36382 358 aa20.03■□□□□ 0.8
LINC01140-209ENST00000589455 IFIT5Q13325 482 aaKnown RBP20.03■□□□□ 0.8
LINC01140-209ENST00000589455 CCDC27Q2M243 656 aa20.03■□□□□ 0.8
LINC01140-209ENST00000589455 DNAAF4Q8WXU2 420 aa20.03■□□□□ 0.8
LINC01140-209ENST00000589455 PCDHAC2Q9Y5I4 1007 aa20.03■□□□□ 0.8
LINC01140-209ENST00000589455 F8W031 263 aaPredicted RBP20.02■□□□□ 0.8
LINC01140-209ENST00000589455 TAF5LO75529 589 aa20.02■□□□□ 0.8
LINC01140-209ENST00000589455 EN2P19622 333 aaPredicted RBP20.02■□□□□ 0.8
LINC01140-209ENST00000589455 FLIIQ13045 1269 aa20.02■□□□□ 0.8
LINC01140-209ENST00000589455 NBPF11Q86T75 865 aa20.02■□□□□ 0.8
LINC01140-209ENST00000589455 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
LINC01140-209ENST00000589455 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.02■□□□□ 0.8
LINC01140-209ENST00000589455 SNAP23O00161 211 aa20.01■□□□□ 0.79
LINC01140-209ENST00000589455 TSR2Q969E8 191 aaKnown RBP20.01■□□□□ 0.79
LINC01140-209ENST00000589455 ZNF333Q96JL9 665 aa20.01■□□□□ 0.79
LINC01140-209ENST00000589455 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
LINC01140-209ENST00000589455 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
LINC01140-209ENST00000589455 FKBP5Q13451 457 aaPredicted RBP20■□□□□ 0.79
LINC01140-209ENST00000589455 SPDYE2Q495Y8 402 aa20■□□□□ 0.79
LINC01140-209ENST00000589455 HELBQ8NG08 1087 aaPredicted RBP20■□□□□ 0.79
LINC01140-209ENST00000589455 OPTNQ96CV9 577 aa20■□□□□ 0.79
LINC01140-209ENST00000589455 ZFYVE28Q9HCC9 887 aa20■□□□□ 0.79
LINC01140-209ENST00000589455 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
LINC01140-209ENST00000589455 KIAA0100Q14667 2235 aaKnown RBP20■□□□□ 0.79
LINC01140-209ENST00000589455 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
LINC01140-209ENST00000589455 GTF2A2P52657 109 aa19.99■□□□□ 0.79
LINC01140-209ENST00000589455 FOXO4P98177 505 aa19.99■□□□□ 0.79
LINC01140-209ENST00000589455 ELP3Q9H9T3 547 aa19.99■□□□□ 0.79
LINC01140-209ENST00000589455 MYH3P11055 1940 aa19.98■□□□□ 0.79
LINC01140-209ENST00000589455 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
LINC01140-209ENST00000589455 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
LINC01140-209ENST00000589455 ZNF70Q9UC06 446 aaPredicted RBP19.98■□□□□ 0.79
LINC01140-209ENST00000589455 AOX1Q06278 1338 aa19.98■□□□□ 0.79
LINC01140-209ENST00000589455 IL16Q14005 1332 aa19.98■□□□□ 0.79
LINC01140-209ENST00000589455 WDHD1O75717 1129 aaPredicted RBP19.97■□□□□ 0.79
LINC01140-209ENST00000589455 MAP3K9P80192 1104 aa19.97■□□□□ 0.79
LINC01140-209ENST00000589455 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
LINC01140-209ENST00000589455 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.97■□□□□ 0.79
LINC01140-209ENST00000589455 WWC1Q8IX03 1113 aa19.97■□□□□ 0.79
LINC01140-209ENST00000589455 TDRD7Q8NHU6 1098 aaKnown RBP19.97■□□□□ 0.79
LINC01140-209ENST00000589455 TEPSINQ96N21 525 aa19.97■□□□□ 0.79
LINC01140-209ENST00000589455 TNNI2P48788 182 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 CAP1Q01518 475 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
LINC01140-209ENST00000589455 CCDC57Q2TAC2 916 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 MFSD14BQ5SR56 506 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 LDHAL6AQ6ZMR3 332 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 BRI3BPQ8WY22 251 aa19.96■□□□□ 0.79
LINC01140-209ENST00000589455 ZCCHC17Q9NP64 241 aaKnown RBP19.96■□□□□ 0.79
LINC01140-209ENST00000589455 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
LINC01140-209ENST00000589455 CCL15-CCL14A0A0B4J2E2 113 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 GNRH1P01148 92 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 UBE4AQ14139 1066 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 CCL15Q16663 113 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 DZIP1LQ8IYY4 767 aaKnown RBP19.95■□□□□ 0.78
LINC01140-209ENST00000589455 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 LAMB1P07942 1786 aa19.95■□□□□ 0.78
LINC01140-209ENST00000589455 VGLL4Q14135 290 aa19.94■□□□□ 0.78
LINC01140-209ENST00000589455 LMBR1LQ6UX01 489 aa19.94■□□□□ 0.78
LINC01140-209ENST00000589455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.94■□□□□ 0.78
LINC01140-209ENST00000589455 TDRD3Q9H7E2 651 aaKnown RBP19.94■□□□□ 0.78
LINC01140-209ENST00000589455 JAG2Q9Y219 1238 aa19.94■□□□□ 0.78
LINC01140-209ENST00000589455 CSADQ9Y600 493 aa19.94■□□□□ 0.78
LINC01140-209ENST00000589455 PTCH2Q9Y6C5 1203 aa19.94■□□□□ 0.78
LINC01140-209ENST00000589455 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms