RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 MYH13Q9UKX3 1938 aa24.49■■□□□ 1.51
DNMT1-216ENST00000588952 UQCRFS1P1P0C7P4 283 aa24.48■■□□□ 1.51
DNMT1-216ENST00000588952 TTC41PQ6P2S7 1318 aa24.48■■□□□ 1.51
DNMT1-216ENST00000588952 PODNQ7Z5L7 613 aa24.48■■□□□ 1.51
DNMT1-216ENST00000588952 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
DNMT1-216ENST00000588952 SNRKQ9NRH2 765 aa24.48■■□□□ 1.51
DNMT1-216ENST00000588952 PSME4Q14997 1843 aa24.47■■□□□ 1.51
DNMT1-216ENST00000588952 FZD9O00144 591 aa24.47■■□□□ 1.51
DNMT1-216ENST00000588952 ZBTB22O15209 634 aa24.47■■□□□ 1.51
DNMT1-216ENST00000588952 CHAF1AQ13111 956 aaPredicted RBP24.47■■□□□ 1.51
DNMT1-216ENST00000588952 GPATCH3Q96I76 525 aa24.47■■□□□ 1.51
DNMT1-216ENST00000588952 BOLA2Q9H3K6 86 aa24.47■■□□□ 1.51
DNMT1-216ENST00000588952 ZNF541Q9H0D2 1346 aa24.46■■□□□ 1.51
DNMT1-216ENST00000588952 RAD17O75943 681 aa24.46■■□□□ 1.51
DNMT1-216ENST00000588952 GTF2IP78347 998 aa24.46■■□□□ 1.51
DNMT1-216ENST00000588952 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
DNMT1-216ENST00000588952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.46■■□□□ 1.51
DNMT1-216ENST00000588952 MXD3Q9BW11 206 aa24.46■■□□□ 1.51
DNMT1-216ENST00000588952 FAM205AQ6ZU69 1335 aa24.45■■□□□ 1.5
DNMT1-216ENST00000588952 SEMA3EO15041 775 aa24.45■■□□□ 1.5
DNMT1-216ENST00000588952 FRAT2O75474 233 aaPredicted RBP24.45■■□□□ 1.5
DNMT1-216ENST00000588952 ZAP70P43403 619 aa24.45■■□□□ 1.5
DNMT1-216ENST00000588952 OSBPL3Q9H4L5 887 aa24.45■■□□□ 1.5
DNMT1-216ENST00000588952 DENND2AQ9ULE3 1009 aa24.45■■□□□ 1.5
DNMT1-216ENST00000588952 AOX1Q06278 1338 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 DCAF8L1A6NGE4 600 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 RGS3P49796 1198 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 CXCL9Q07325 125 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 FBXW7Q969H0 707 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 EDC3Q96F86 508 aaKnown RBP24.44■■□□□ 1.5
DNMT1-216ENST00000588952 HAUS7Q99871 368 aa24.44■■□□□ 1.5
DNMT1-216ENST00000588952 PDS5AQ29RF7 1337 aaKnown RBP24.43■■□□□ 1.5
DNMT1-216ENST00000588952 USP17L3A6NCW0 530 aa24.43■■□□□ 1.5
DNMT1-216ENST00000588952 USP17L4A6NCW7 530 aa24.43■■□□□ 1.5
DNMT1-216ENST00000588952 PSMD14O00487 310 aa24.43■■□□□ 1.5
DNMT1-216ENST00000588952 GLRX3O76003 335 aaKnown RBP24.43■■□□□ 1.5
DNMT1-216ENST00000588952 DACT2Q5SW24 774 aa24.43■■□□□ 1.5
DNMT1-216ENST00000588952 USP17L1Q7RTZ2 530 aa24.43■■□□□ 1.5
DNMT1-216ENST00000588952 DNAJC2Q99543 621 aaKnown RBP24.43■■□□□ 1.5
DNMT1-216ENST00000588952 MAP4K4O95819 1239 aaPredicted RBP24.42■■□□□ 1.5
DNMT1-216ENST00000588952 CYP2E1P05181 493 aaPredicted RBP24.42■■□□□ 1.5
DNMT1-216ENST00000588952 GRIK5Q16478 980 aa24.42■■□□□ 1.5
DNMT1-216ENST00000588952 TTLL5Q6EMB2 1281 aa24.42■■□□□ 1.5
DNMT1-216ENST00000588952 CERS5Q8N5B7 392 aa24.42■■□□□ 1.5
DNMT1-216ENST00000588952 ANTXR1Q9H6X2 564 aa24.42■■□□□ 1.5
DNMT1-216ENST00000588952 ERC2O15083 957 aa24.41■■□□□ 1.5
DNMT1-216ENST00000588952 STRIP1Q5VSL9 837 aa24.41■■□□□ 1.5
DNMT1-216ENST00000588952 CIAPIN1Q6FI81 312 aa24.41■■□□□ 1.5
DNMT1-216ENST00000588952 TBC1D9Q6ZT07 1266 aa24.41■■□□□ 1.5
DNMT1-216ENST00000588952 PIH1D3Q9NQM4 214 aaKnown RBP24.41■■□□□ 1.5
DNMT1-216ENST00000588952 VIL1P09327 827 aaKnown RBP24.4■■□□□ 1.5
DNMT1-216ENST00000588952 GSPT1P15170 499 aaKnown RBP24.4■■□□□ 1.5
DNMT1-216ENST00000588952 EIF6P56537 245 aaKnown RBP24.4■■□□□ 1.5
DNMT1-216ENST00000588952 GOLIM4O00461 696 aa24.39■■□□□ 1.49
DNMT1-216ENST00000588952 TTC22Q5TAA0 569 aa24.39■■□□□ 1.49
DNMT1-216ENST00000588952 MYO5AQ9Y4I1 1855 aaKnown RBP24.38■■□□□ 1.49
DNMT1-216ENST00000588952 SALL1Q9NSC2 1324 aa24.38■■□□□ 1.49
DNMT1-216ENST00000588952 MFSD14BQ5SR56 506 aa24.38■■□□□ 1.49
DNMT1-216ENST00000588952 RSBN1LQ6PCB5 846 aaPredicted RBP24.38■■□□□ 1.49
DNMT1-216ENST00000588952 WDR66Q8TBY9 1149 aa24.38■■□□□ 1.49
DNMT1-216ENST00000588952 PAG1Q9NWQ8 432 aa24.38■■□□□ 1.49
DNMT1-216ENST00000588952 ZBTB12Q9Y330 459 aaPredicted RBP24.38■■□□□ 1.49
DNMT1-216ENST00000588952 GJA3Q9Y6H8 435 aa24.37■■□□□ 1.49
DNMT1-216ENST00000588952 DOCK2Q92608 1830 aa24.37■■□□□ 1.49
DNMT1-216ENST00000588952 PRDX5P30044 214 aa24.36■■□□□ 1.49
DNMT1-216ENST00000588952 TNIP1Q15025 636 aa24.36■■□□□ 1.49
DNMT1-216ENST00000588952 GMLQ99445 158 aa24.36■■□□□ 1.49
DNMT1-216ENST00000588952 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
DNMT1-216ENST00000588952 FKBP1AP62942 108 aaKnown RBP24.35■■□□□ 1.49
DNMT1-216ENST00000588952 TBC1D22AQ8WUA7 517 aa24.35■■□□□ 1.49
DNMT1-216ENST00000588952 ABCF2Q9UG63 623 aa24.35■■□□□ 1.49
DNMT1-216ENST00000588952 DDNO94850 711 aaPredicted RBP24.34■■□□□ 1.49
DNMT1-216ENST00000588952 SHTN1A0MZ66 631 aa24.33■■□□□ 1.49
DNMT1-216ENST00000588952 GMPSP49915 693 aaPredicted RBP24.33■■□□□ 1.49
DNMT1-216ENST00000588952 GPC2Q8N158 579 aa24.33■■□□□ 1.49
DNMT1-216ENST00000588952 ZNF384Q8TF68 577 aa24.33■■□□□ 1.49
DNMT1-216ENST00000588952 F8W031 263 aaPredicted RBP24.32■■□□□ 1.48
DNMT1-216ENST00000588952 CHGBP05060 677 aa24.32■■□□□ 1.48
DNMT1-216ENST00000588952 KIAA0825Q8IV33 1275 aa24.32■■□□□ 1.48
DNMT1-216ENST00000588952 MAST2Q6P0Q8 1798 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 ADAMTSL1Q8N6G6 1762 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 TRIM6-TRIM34B2RNG4 842 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 LDHBP07195 334 aaKnown RBP24.31■■□□□ 1.48
DNMT1-216ENST00000588952 SDSP20132 328 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 TTF1Q15361 905 aaPredicted RBP24.31■■□□□ 1.48
DNMT1-216ENST00000588952 ZGPATQ8N5A5 531 aaKnown RBP24.31■■□□□ 1.48
DNMT1-216ENST00000588952 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 AGBL3Q8NEM8 1001 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 LRP2BPQ9P2M1 347 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 MYO3BQ8WXR4 1341 aa24.31■■□□□ 1.48
DNMT1-216ENST00000588952 IDH1O75874 414 aaKnown RBP24.3■■□□□ 1.48
DNMT1-216ENST00000588952 SLFNL1Q499Z3 407 aa24.3■■□□□ 1.48
DNMT1-216ENST00000588952 ERICH6Q7L0X2 663 aa24.3■■□□□ 1.48
DNMT1-216ENST00000588952 RILPL2Q969X0 211 aa24.3■■□□□ 1.48
DNMT1-216ENST00000588952 RAI14Q9P0K7 980 aa24.3■■□□□ 1.48
DNMT1-216ENST00000588952 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
DNMT1-216ENST00000588952 RPS12P25398 132 aaKnown RBP24.29■■□□□ 1.48
DNMT1-216ENST00000588952 SCNN1DP51172 638 aa24.29■■□□□ 1.48
DNMT1-216ENST00000588952 MECOMQ03112 1051 aa24.29■■□□□ 1.48
DNMT1-216ENST00000588952 NSUN4Q96CB9 384 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms