RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 PPFIBP2Q8ND30 876 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 CBX8Q9HC52 389 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
LAMA3-210ENST00000588770 SPECC1Q5M775 1068 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 FERMT3Q86UX7 667 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 MPHOSPH8Q99549 860 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 EXOC1Q9NV70 894 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 MTMR7Q9Y216 660 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 RASSF10A6NK89 507 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 H3BQF6 201 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 RHOXF2BP0C7M4 288 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 KCNV1Q6PIU1 500 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 RHOXF2Q9BQY4 288 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 CAPN15O75808 1086 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 PSMC4P43686 418 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 IMMTQ16891 758 aaKnown RBP8.81□□□□□ -1
LAMA3-210ENST00000588770 RUNDC1Q96C34 613 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 SUN2Q9UH99 717 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
LAMA3-210ENST00000588770 ERICH2A1L162 156 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 HNRNPCP07910 306 aaKnown RBP eCLIP8.81□□□□□ -1
LAMA3-210ENST00000588770 CLTAP09496 248 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
LAMA3-210ENST00000588770 PPFIA1Q13136 1202 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 KLHL10Q6JEL2 608 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 GORASP1Q9BQQ3 440 aa8.81□□□□□ -1
LAMA3-210ENST00000588770 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -1
LAMA3-210ENST00000588770 ACTR5Q9H9F9 607 aaPredicted RBP8.81□□□□□ -1
LAMA3-210ENST00000588770 PUF60Q9UHX1 559 aaKnown RBP8.81□□□□□ -1
LAMA3-210ENST00000588770 ABL2P42684 1182 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 NECTIN2Q92692 538 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 TSR2Q969E8 191 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 PPP1R13BQ96KQ4 1090 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 EPAS1Q99814 870 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 FUT8Q9BYC5 575 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 USP16Q9Y5T5 823 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 MEFVO15553 781 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 TADA3O75528 432 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 SASH3O75995 380 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 INHBEP58166 350 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 CCDC148Q8NFR7 591 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 GCC1Q96CN9 775 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 L2HGDHQ9H9P8 463 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 TRPC6Q9Y210 931 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 PHLPP2Q6ZVD8 1323 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 DMPKQ09013 629 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 PNMA8AQ86V59 439 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 TMCO5AQ8N6Q1 288 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 LUC7LQ9NQ29 371 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 DNAAF2Q9NVR5 837 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 CWC25Q9NXE8 425 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 ZSCAN9O15535 394 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 SERPINC1P01008 464 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 SMTNP53814 917 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 ABTB1Q969K4 478 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 MMTAG2Q9BU76 263 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 EPC1Q9H2F5 836 aa8.8□□□□□ -1
LAMA3-210ENST00000588770 DDX19AQ9NUU7 478 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 NOB1Q9ULX3 412 aaKnown RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 CTDP1Q9Y5B0 961 aaPredicted RBP8.8□□□□□ -1
LAMA3-210ENST00000588770 CTAGE15A4D2H0 777 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 LSM1O15116 133 aaKnown RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 CYP2E1P05181 493 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 CTAGE8P0CG41 777 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 TCERG1LQ5VWI1 586 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CTAGE6Q86UF2 777 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CTAGE4Q8IX94 777 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 RHBDL2Q9NX52 303 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 PPFIA3O75145 1194 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 DNAJC8O75937 253 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 TROVE2P10155 538 aaKnown RBP eCLIP8.79□□□□□ -1
LAMA3-210ENST00000588770 RHBDL3P58872 404 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 SLC4A8Q2Y0W8 1093 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 TRIM68Q6AZZ1 485 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 BTN2A1Q7KYR7 527 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 RBM41Q96IZ5 413 aaKnown RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 YY1P25490 414 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 GCLCP48506 637 aaPredicted RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 IFT88Q13099 833 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 STIM1Q13586 685 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CASP8Q14790 479 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CCDC152Q4G0S7 254 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CCDC155Q8N6L0 562 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 NSMCE1Q8WV22 266 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CUL5Q93034 780 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 BHMTQ93088 406 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 NOP53Q9NZM5 478 aaKnown RBP8.79□□□□□ -1
LAMA3-210ENST00000588770 ZNF24P17028 368 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 NLRP5P59047 1200 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
LAMA3-210ENST00000588770 CDC25BP30305 580 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms