RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
TUBD1-209ENST00000588706 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 GPR108Q9NPR9 543 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 SNX14Q9Y5W7 946 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 JCADQ9P266 1359 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
TUBD1-209ENST00000588706 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 ESPNB1AK53 854 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 GCKRQ14397 625 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 AACSQ86V21 672 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 ZGPATQ8N5A5 531 aaKnown RBP12.36□□□□□ -0.43
TUBD1-209ENST00000588706 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 SMC3Q9UQE7 1217 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
TUBD1-209ENST00000588706 KCNQ3O43525 872 aa12.35□□□□□ -0.43
TUBD1-209ENST00000588706 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
TUBD1-209ENST00000588706 CAVIN1Q6NZI2 390 aaKnown RBP12.35□□□□□ -0.43
TUBD1-209ENST00000588706 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
TUBD1-209ENST00000588706 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-209ENST00000588706 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
TUBD1-209ENST00000588706 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
TUBD1-209ENST00000588706 RPAP1Q9BWH6 1393 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-209ENST00000588706 MEGF6O75095 1541 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
TUBD1-209ENST00000588706 CSB-PGBD3P0DP91 1061 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 ZSCAN22P10073 491 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-209ENST00000588706 ATP5JP18859 108 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 KIF3AQ9Y496 699 aa12.34□□□□□ -0.43
TUBD1-209ENST00000588706 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 SLC19A1P41440 591 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 TERF1P54274 439 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 UBE2HP62256 183 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 NECTIN1Q15223 517 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 PTPRNQ16849 979 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 PLA2G2CQ5R387 149 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
TUBD1-209ENST00000588706 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.33□□□□□ -0.44
TUBD1-209ENST00000588706 SUCLG2Q96I99 432 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-209ENST00000588706 BICC1Q9H694 974 aaKnown RBP12.33□□□□□ -0.44
TUBD1-209ENST00000588706 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
TUBD1-209ENST00000588706 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
TUBD1-209ENST00000588706 ZBTB24O43167 697 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-209ENST00000588706 STX6O43752 255 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
TUBD1-209ENST00000588706 KCNJ4P48050 445 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 CABP4P57796 275 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 TSHZ3Q63HK5 1081 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 WDR17Q8IZU2 1322 aa12.32□□□□□ -0.44
TUBD1-209ENST00000588706 GLI3P10071 1580 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 IGKV5-2P06315 115 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
TUBD1-209ENST00000588706 AK2P54819 239 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 GAS2L3Q86XJ1 694 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 FSD1Q9BTV5 496 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 PANK2Q9BZ23 570 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 CCDC39Q9UFE4 941 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 ELP1O95163 1332 aa12.31□□□□□ -0.44
TUBD1-209ENST00000588706 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 CIAO1O76071 339 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 SASH1O94885 1247 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 F13A1P00488 732 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
TUBD1-209ENST00000588706 CREB3L3Q68CJ9 461 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
TUBD1-209ENST00000588706 UPF3BQ9BZI7 483 aaKnown RBP12.3□□□□□ -0.44
TUBD1-209ENST00000588706 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
TUBD1-209ENST00000588706 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
TUBD1-209ENST00000588706 TCHHQ07283 1943 aa12.29□□□□□ -0.44
TUBD1-209ENST00000588706 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms