RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 F12P00748 615 aaPredicted RBP7.52□□□□□ -1.21
CHUK-203ENST00000588656 WDR4P57081 412 aaKnown RBP7.52□□□□□ -1.21
CHUK-203ENST00000588656 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
CHUK-203ENST00000588656 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
CHUK-203ENST00000588656 MRPL14Q6P1L8 145 aaKnown RBP7.52□□□□□ -1.21
CHUK-203ENST00000588656 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.21
CHUK-203ENST00000588656 LTBP1Q14766 1721 aa7.52□□□□□ -1.21
CHUK-203ENST00000588656 HEG1Q9ULI3 1381 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 FAM181BA6NEQ2 426 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 FOXN1O15353 648 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 DIAPH1O60610 1272 aaKnown RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 TIMP2P16035 220 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 EIF5P55010 431 aaKnown RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 TEFQ10587 303 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 NR5A1Q13285 461 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 ARID5BQ14865 1188 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 AGERQ15109 404 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 EAPPQ56P03 285 aaPredicted RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 PRPF40BQ6NWY9 871 aaKnown RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 BPHLQ86WA6 291 aaPredicted RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 IL17REQ8NFR9 667 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 CCER1Q8TC90 406 aaPredicted RBP7.51□□□□□ -1.21
CHUK-203ENST00000588656 FOXJ1Q92949 421 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 TAOK3Q9H2K8 898 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 MAP10Q9P2G4 905 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 LAMB2P55268 1798 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 ADAMTSL1Q8N6G6 1762 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 ZNF541Q9H0D2 1346 aa7.51□□□□□ -1.21
CHUK-203ENST00000588656 CASP8AP2Q9UKL3 1982 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 CAMTA2O94983 1202 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 FMR1Q06787 632 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHUK-203ENST00000588656 DCTN1Q14203 1278 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 ZNF790Q6PG37 636 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
CHUK-203ENST00000588656 NGEFQ8N5V2 710 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 CNBD1Q8NA66 436 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 KLF16Q9BXK1 252 aaPredicted RBP7.5□□□□□ -1.21
CHUK-203ENST00000588656 ZNF277Q9NRM2 450 aaPredicted RBP7.5□□□□□ -1.21
CHUK-203ENST00000588656 USP16Q9Y5T5 823 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 KDM3BQ7LBC6 1761 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 COL4A5P29400 1685 aa7.5□□□□□ -1.21
CHUK-203ENST00000588656 POLR2AP24928 1970 aaKnown RBP7.5□□□□□ -1.21
CHUK-203ENST00000588656 TCERG1O14776 1098 aaKnown RBP7.49□□□□□ -1.21
CHUK-203ENST00000588656 STARD3NLO95772 234 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 PDE6BP35913 854 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 PDE4DQ08499 809 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 GRM1Q13255 1194 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 MCM10Q7L590 875 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 RNF123Q5XPI4 1314 aa7.49□□□□□ -1.21
CHUK-203ENST00000588656 A0A087WZG4 1122 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 BTBD11A6QL63 1104 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 H3BM21 787 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 LILRB3O75022 631 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 SRGNP10124 158 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 PRKAR2BP31323 418 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 GMPRP36959 345 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 ST5P78524 1137 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 MYSM1Q5VVJ2 828 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 NBPF5PQ86XG9 351 aaPredicted RBP7.48□□□□□ -1.21
CHUK-203ENST00000588656 TSC1Q92574 1164 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 ZNF428Q96B54 188 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 PURBQ96QR8 312 aaKnown RBP7.48□□□□□ -1.21
CHUK-203ENST00000588656 BRIP1Q9BX63 1249 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 MIS18AQ9NYP9 233 aa7.48□□□□□ -1.21
CHUK-203ENST00000588656 ZC3H4Q9UPT8 1303 aaKnown RBP7.48□□□□□ -1.21
CHUK-203ENST00000588656 ANKRD36CQ5JPF3 1778 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 PER1O15534 1290 aaPredicted RBP7.47□□□□□ -1.21
CHUK-203ENST00000588656 GRM5P41594 1212 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 VEGFBP49765 207 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 HLFQ16534 295 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
CHUK-203ENST00000588656 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
CHUK-203ENST00000588656 HELBQ8NG08 1087 aaPredicted RBP7.47□□□□□ -1.21
CHUK-203ENST00000588656 FMNL2Q96PY5 1086 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 RSPH6AQ9H0K4 717 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 TAF1DQ9H5J8 278 aaPredicted RBP7.47□□□□□ -1.21
CHUK-203ENST00000588656 LIMD1Q9UGP4 676 aa7.47□□□□□ -1.21
CHUK-203ENST00000588656 CNTNAP1P78357 1384 aa7.46□□□□□ -1.21
CHUK-203ENST00000588656 ABCC12Q96J65 1359 aa7.46□□□□□ -1.21
CHUK-203ENST00000588656 ZIC2O95409 532 aaPredicted RBP7.46□□□□□ -1.22
CHUK-203ENST00000588656 IL6STP40189 918 aaPredicted RBP7.46□□□□□ -1.22
CHUK-203ENST00000588656 LBX1P52954 281 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 QPCTQ16769 361 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 STYK1Q6J9G0 422 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
CHUK-203ENST00000588656 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 CNKSR1Q969H4 720 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 MASTLQ96GX5 879 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 TIMELESSQ9UNS1 1208 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 NIP7Q9Y221 180 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHUK-203ENST00000588656 GJA3Q9Y6H8 435 aa7.46□□□□□ -1.22
CHUK-203ENST00000588656 UPP2O95045 317 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 GPTP24298 496 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 CCDC93Q567U6 631 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms