RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 DDX46Q7L014 1031 aaKnown RBP9.5□□□□□ -0.89
TPM4-210ENST00000588507 GRAPLQ8TC17 118 aaPredicted RBP9.5□□□□□ -0.89
TPM4-210ENST00000588507 TSPYL2Q9H2G4 693 aaPredicted RBP9.5□□□□□ -0.89
TPM4-210ENST00000588507 ZCCHC17Q9NP64 241 aaKnown RBP9.5□□□□□ -0.89
TPM4-210ENST00000588507 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
TPM4-210ENST00000588507 POLLQ9UGP5 575 aa9.5□□□□□ -0.89
TPM4-210ENST00000588507 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
TPM4-210ENST00000588507 ATRXP46100 2492 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 ELNP15502 786 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 KCTD2Q14681 263 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 CCDC85BQ15834 202 aaPredicted RBP9.49□□□□□ -0.89
TPM4-210ENST00000588507 PXYLP1Q8TE99 480 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 UIMC1Q96RL1 719 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
TPM4-210ENST00000588507 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■■■■ 31.9
TPM4-210ENST00000588507 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 CPA4Q9UI42 421 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 EPG5Q9HCE0 2579 aa9.49□□□□□ -0.89
TPM4-210ENST00000588507 USP2O75604 605 aaPredicted RBP9.48□□□□□ -0.89
TPM4-210ENST00000588507 NTSR2O95665 410 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 GPTP24298 496 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 FCGRTP55899 365 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 SUPT20HL1Q3ZLR7 823 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 C9orf50Q5SZB4 431 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 OGFOD1Q8N543 542 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 ZBTB38Q8NAP3 1195 aaPredicted RBP9.48□□□□□ -0.89
TPM4-210ENST00000588507 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM4-210ENST00000588507 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 GABRQQ9UN88 632 aa9.48□□□□□ -0.89
TPM4-210ENST00000588507 COL1A1P02452 1464 aaPredicted RBP9.47□□□□□ -0.89
TPM4-210ENST00000588507 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 PODNQ7Z5L7 613 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 IGSF5Q9NSI5 407 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 PFASO15067 1338 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
TPM4-210ENST00000588507 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
TPM4-210ENST00000588507 BTBD19C9JJ37 291 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 SASH1O94885 1247 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 GPSM2P81274 684 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 TEFQ10587 303 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
TPM4-210ENST00000588507 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 ZNF576Q9H609 170 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 PPP2R3BQ9Y5P8 575 aa9.46□□□□□ -0.9
TPM4-210ENST00000588507 DDX60LQ5H9U9 1706 aaKnown RBP9.45□□□□□ -0.9
TPM4-210ENST00000588507 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 CETPP11597 493 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 FLT3LGP49771 235 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 KCNQ1P51787 676 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
TPM4-210ENST00000588507 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 MMP14P50281 582 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 TFF2Q03403 129 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 IRF5Q13568 498 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 COL9A2Q14055 689 aaPredicted RBP9.44□□□□□ -0.9
TPM4-210ENST00000588507 CSPP1Q1MSJ5 1256 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 OGDHLQ9ULD0 1010 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 MYO9BQ13459 2157 aa9.44□□□□□ -0.9
TPM4-210ENST00000588507 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
TPM4-210ENST00000588507 KMT2BQ9UMN6 2715 aaPredicted RBP9.44□□□□□ -0.9
TPM4-210ENST00000588507 MAP3K15Q6ZN16 1313 aa9.43□□□□□ -0.9
TPM4-210ENST00000588507 U2AF1L5P0DN76 240 aaPredicted RBP9.43□□□□□ -0.9
TPM4-210ENST00000588507 COL6A1P12109 1028 aa9.43□□□□□ -0.9
TPM4-210ENST00000588507 DNAJB2P25686 324 aa9.43□□□□□ -0.9
TPM4-210ENST00000588507 U2AF1Q01081 240 aaKnown RBP eCLIP9.43□□□□□ -0.9
TPM4-210ENST00000588507 NBPF12Q5TAG4 269 aaPredicted RBP9.43□□□□□ -0.9
TPM4-210ENST00000588507 ZNF34Q8IZ26 560 aa9.43□□□□□ -0.9
TPM4-210ENST00000588507 LRRC37AA6NMS7 1700 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 KCNQ3O43525 872 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 SNRPA1P09661 255 aaKnown RBP9.42□□□□□ -0.9
TPM4-210ENST00000588507 IGFBP4P22692 258 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 PARP10Q53GL7 1025 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 UTP14AQ9BVJ6 771 aaKnown RBP9.42□□□□□ -0.9
TPM4-210ENST00000588507 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 PRDM12Q9H4Q4 367 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
TPM4-210ENST00000588507 NUP98P52948 1817 aa9.42□□□□□ -0.9
TPM4-210ENST00000588507 CFAP54Q96N23 3096 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 GFRA3O60609 400 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
TPM4-210ENST00000588507 KIF6Q6ZMV9 814 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 NGEFQ8N5V2 710 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 TESK2Q96S53 571 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 TAOK2Q9UL54 1235 aa9.41□□□□□ -0.9
TPM4-210ENST00000588507 PSME4Q14997 1843 aa9.4□□□□□ -0.9
TPM4-210ENST00000588507 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
TPM4-210ENST00000588507 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
TPM4-210ENST00000588507 TLL1O43897 1013 aa9.4□□□□□ -0.9
TPM4-210ENST00000588507 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms