RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 NDUFB9Q9Y6M9 179 aa12.63□□□□□ -0.39
CHMP1B-202ENST00000588284 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 GYG1P46976 350 aa12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 UBE3CQ15386 1083 aa12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 MAP4K1Q92918 833 aa12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
CHMP1B-202ENST00000588284 A0A0D9SFI3 127 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 HSPA4P34932 840 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 GPSM2P81274 684 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 RASGRF1Q13972 1273 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 APPBP2Q92624 585 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
CHMP1B-202ENST00000588284 IDH1O75874 414 aaKnown RBP12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 POLD1P28340 1107 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 MPNDQ8N594 471 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 SNX21Q969T3 373 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
CHMP1B-202ENST00000588284 C6orf229H3BNL8 230 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 UFL1O94874 794 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 ADD2P35612 726 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 PI16Q6UXB8 463 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 EYA3Q99504 573 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 KIF2CQ99661 725 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 TAF1P21675 1872 aa12.59□□□□□ -0.39
CHMP1B-202ENST00000588284 CASZ1Q86V15 1759 aa12.58□□□□□ -0.39
CHMP1B-202ENST00000588284 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 ST18O60284 1047 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 PTH1RQ03431 593 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 TBC1D16Q8TBP0 767 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 KCNB2Q92953 911 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 DSCC1Q9BVC3 393 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 IL25Q9H293 177 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
CHMP1B-202ENST00000588284 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 PDE6AP16499 860 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 PSMA5P28066 241 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 MCM2P49736 904 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 KRT32Q14532 448 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 PDGFDQ9GZP0 370 aaPredicted RBP12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 COL4A1P02462 1669 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 IRS2Q9Y4H2 1338 aa12.57□□□□□ -0.4
CHMP1B-202ENST00000588284 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 TGFB2P61812 414 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 COA1Q9GZY4 146 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 POLLQ9UGP5 575 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 IQSEC3Q9UPP2 1182 aaPredicted RBP12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
CHMP1B-202ENST00000588284 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 G3V3G9 751 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 HSPD1P10809 573 aaKnown RBP12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 IL1R1P14778 569 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 GNAT2P19087 354 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 KLRK1P26718 216 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 CREB3L3Q68CJ9 461 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 PRPF40BQ6NWY9 871 aaKnown RBP12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 TBC1D22AQ8WUA7 517 aa12.55□□□□□ -0.4
CHMP1B-202ENST00000588284 AIDAQ96BJ3 306 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms