RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 FAM160A1Q05DH4 1040 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 CAMK2GQ13555 558 aaPredicted RBP8.14□□□□□ -1.11
TUBD1-208ENST00000588009 COL9A2Q14055 689 aaPredicted RBP8.14□□□□□ -1.11
TUBD1-208ENST00000588009 RPS26P11Q5JNZ5 115 aaPredicted RBP8.14□□□□□ -1.11
TUBD1-208ENST00000588009 CKAP2LQ8IYA6 745 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
TUBD1-208ENST00000588009 J3QW42 95 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 PDE2AO00408 941 aaPredicted RBP8.13□□□□□ -1.11
TUBD1-208ENST00000588009 GPLD1P80108 840 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 NEUROD1Q13562 356 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 FAM182BQ5T319 152 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 AGMOQ6ZNB7 445 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 ZNF408Q9H9D4 720 aa8.13□□□□□ -1.11
TUBD1-208ENST00000588009 ERBB4Q15303 1308 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
TUBD1-208ENST00000588009 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 SNAP47Q5SQN1 464 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 TTBK2Q6IQ55 1244 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 GOLM1Q8NBJ4 401 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
TUBD1-208ENST00000588009 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
TUBD1-208ENST00000588009 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 RASSF4Q9H2L5 321 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 STRIP2Q9ULQ0 834 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
TUBD1-208ENST00000588009 FGFR3P22607 806 aa8.11□□□□□ -1.11
TUBD1-208ENST00000588009 ETFBP38117 255 aa8.11□□□□□ -1.11
TUBD1-208ENST00000588009 RPS26P62854 115 aaKnown RBP8.11□□□□□ -1.11
TUBD1-208ENST00000588009 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
TUBD1-208ENST00000588009 BMS1Q14692 1282 aaKnown RBP8.11□□□□□ -1.11
TUBD1-208ENST00000588009 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
TUBD1-208ENST00000588009 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
TUBD1-208ENST00000588009 UBP1Q9NZI7 540 aa8.11□□□□□ -1.11
TUBD1-208ENST00000588009 PHF24Q9UPV7 400 aa8.11□□□□□ -1.11
TUBD1-208ENST00000588009 PAGE1O75459 146 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 ITGA6P23229 1130 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 ATP11AP98196 1134 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 APOBRQ0VD83 1088 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 SERINC3Q13530 473 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 NFE2L2Q16236 605 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 NKD1Q969G9 470 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 POP1Q99575 1024 aaKnown RBP8.1□□□□□ -1.11
TUBD1-208ENST00000588009 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
TUBD1-208ENST00000588009 MRVI1Q9Y6F6 885 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
TUBD1-208ENST00000588009 GHRHP01286 108 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 NCLP19338 710 aaKnown RBP8.09□□□□□ -1.11
TUBD1-208ENST00000588009 CRKP46108 304 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 CTBSQ01459 385 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 PCSK7Q16549 785 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 SDE2Q6IQ49 451 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 ANKS3Q6ZW76 656 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 SLITRK4Q8IW52 837 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 MUC3BQ9H195 1237 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 TMEM39AQ9NV64 488 aa8.09□□□□□ -1.11
TUBD1-208ENST00000588009 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
TUBD1-208ENST00000588009 CDK11AQ9UQ88 783 aaPredicted RBP8.09□□□□□ -1.11
TUBD1-208ENST00000588009 ANKRD62A6NC57 917 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 K7ELQ4 463 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-208ENST00000588009 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
TUBD1-208ENST00000588009 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 CPLX3Q8WVH0 158 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 MKL1Q969V6 931 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 MRFAP1L1Q96HT8 127 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 RBSNQ9H1K0 784 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
TUBD1-208ENST00000588009 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-208ENST00000588009 KLF4O43474 513 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 PPFIA3O75145 1194 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 PPP2R3AQ06190 1150 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 BNC2Q6ZN30 1099 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-208ENST00000588009 ZNF662Q6ZS27 426 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 CCDC84Q86UT8 332 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-208ENST00000588009 BSNDQ8WZ55 320 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 SRRTQ9BXP5 876 aaKnown RBP8.07□□□□□ -1.12
TUBD1-208ENST00000588009 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
TUBD1-208ENST00000588009 SIRPGQ9P1W8 387 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 PCDHB5Q9Y5E4 795 aa8.07□□□□□ -1.12
TUBD1-208ENST00000588009 TLR3O15455 904 aaKnown RBP8.06□□□□□ -1.12
TUBD1-208ENST00000588009 SMNDC1O75940 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
TUBD1-208ENST00000588009 F13A1P00488 732 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 EIF2AK2P19525 551 aaKnown RBP8.06□□□□□ -1.12
TUBD1-208ENST00000588009 BMP6P22004 513 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
TUBD1-208ENST00000588009 TBC1D8BQ0IIM8 1120 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 SEZ6Q53EL9 994 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 SYT9Q86SS6 491 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 NLGN1Q8N2Q7 840 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 ANAPC16Q96DE5 110 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 LRRC3Q9BY71 257 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms